| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2577 |
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| Symbol | |
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| ID | 6987827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2776248 |
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| End bp | 2777234 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380845 |
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| Product | ABC-type [(GlcNAc)2] transporter, permease protein |
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| Protein accession | YP_002263923 |
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| Protein GI | 209695993 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTTT TTCTAAGACG TTTATCGTTC TATTTTATTG CGTTGGTCGT TGCTGCAACG
ATTAACTTTA TTATACCGCG AGCAATGCCA GGTGACCCAG TTACCATGAT GTTCGCGAAT
GCGACTACTC AGGTAACTCC TGAGCGTATA GAAGCTATGA AACAACTACT TGGTTTTGTT
GATGGGCCTC TTTATCAGCA ATACTTTATC TATATTAAAA ATATCCTAAC TTGGGAATTA
GGTACTTCAA TTAAATTCTA CCCTCTAAGT GTAAATACAC TATTAGGTGG TGCATTTGGT
TGGTCTCTTT TCTTGGCGGG TACTGCGGTT GTTCTATCTT TCTCTCTAGG TTCTATATTA
GGTATTTTTG CGGCTTGGAA ACGAGGCAGC GCTTATGACA CATTTATCTC TCCTGGGATG
TTGGTTATCC AAGCGGTACC ACAAGTAGTT ATTGCGATGC TTGCCATGTT TACTTTTGCC
GTGGGATTAA AATGGTTCCC CACAGGTTAT GCATATACAC CAGGTAATAT TCCCGACTGG
ACTAGCTGGG CATTTATTAA AGATGTCGCT TACCACGCTA TTCTTCCTTT GTTGTGTGCA
TCAATAGTTC AAATTGGTGG CTTCCTGATA AACATGCGTA ACAACATGAT TAATCTGCTT
GGTGAAGACT ACATCACCAT GGCAAAAGGC AAGGGATTGA GTGAAAACAG AGTGGTATTT
AACTACGCTG CTCGTAACGC AATGCTACCA AGCGTTACTG CTTTATCAAT GTCTTTAGGT
ATGGCTATTG GCGGTCAACT TATTGTTGAA ATCATTTTTA ACTACCCGGG TCTTGGCTCT
GTATTATTCA ACGCCATTAA TTCTCGAGAT TACCAAGTAC TTCAAGGTCA GCTATTAATC
ATGACTCTGT TTATGCTCTT CTTTAACCTT CTTGCAGACA TGTTATACGT TGTTCTAGAC
CCTCGCTTAC GCAAGGGAGG AAAATAA
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| Protein sequence | MGFFLRRLSF YFIALVVAAT INFIIPRAMP GDPVTMMFAN ATTQVTPERI EAMKQLLGFV
DGPLYQQYFI YIKNILTWEL GTSIKFYPLS VNTLLGGAFG WSLFLAGTAV VLSFSLGSIL
GIFAAWKRGS AYDTFISPGM LVIQAVPQVV IAMLAMFTFA VGLKWFPTGY AYTPGNIPDW
TSWAFIKDVA YHAILPLLCA SIVQIGGFLI NMRNNMINLL GEDYITMAKG KGLSENRVVF
NYAARNAMLP SVTALSMSLG MAIGGQLIVE IIFNYPGLGS VLFNAINSRD YQVLQGQLLI
MTLFMLFFNL LADMLYVVLD PRLRKGGK
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