| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2437 |
|---|
| Symbol | |
|---|
| ID | 6989058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 2609599 |
|---|
| End bp | 2610042 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643380707 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002263791 |
|---|
| Protein GI | 209695861 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACCG TTAACGATAT GATGACAACA CATCCTCATA CCCTGCTTCG TTCAAATTCA
TTAGAAGATG CTAAAACACT AATGGATGAA CATTGTATTA GGCACATACC GATTATAGAA
ACGGATGACA CATTGATTGG ATTAGTCACA CAACGAGACT TATTGGCAGC TCAAGAGTCT
TGCCTAGAAA AACCAACATT TGAAGAAATA TCAACGTTAG ATATCCCATT AAACTCAATC
ATGCACAAAA ATGTCATGAG TATTTCTCCA CATGGGGGAT TAAAAGCAGC TGCAGTATTC
ATGCAAAAAC ACAAAGTAGG TTGCCTGCCA GTGGTTGAAC ATGGCAAATT GGTGGGCATA
ATCACAGATT CTGATTTTGT TACGATTGCG ATTAATTTAT TGGAATTACA AGAAGAAGTG
GATCCGATGG AAATTGATGA ATAA
|
|---|
| Protein sequence | MFTVNDMMTT HPHTLLRSNS LEDAKTLMDE HCIRHIPIIE TDDTLIGLVT QRDLLAAQES
CLEKPTFEEI STLDIPLNSI MHKNVMSISP HGGLKAAAVF MQKHKVGCLP VVEHGKLVGI
ITDSDFVTIA INLLELQEEV DPMEIDE
|
|---|
| |