Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2407 |
Symbol | |
ID | 6987742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2575504 |
End bp | 2576358 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643380677 |
Product | hypothetical protein |
Protein accession | YP_002263761 |
Protein GI | 209695831 |
COG category | [S] Function unknown |
COG ID | [COG3021] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.286473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA AAACAATATT TATATCAACC GTTGCACTGC TTATTGGTGC GATGATTATG GCTAAATCGT TTATTTTTAC GATCCCTTTA AAACCAGAGT TAATAGAACT TACGCCTGAT TCTATGGATT ATAAGACGGG TTGTGCTGAG TTCGATGAAT CAAAACCTAT CGACCGTGAT GGTACTATCA ACGTACTTGT TTGGAATATT TATAAACAAC AAAAACAAGA CTGGGAACCT GCGTTAAGAA AGTTAACTCA AAAAGCAGAT TTGGTTTTAT TGCAAGAAGC GAGTTTAACG CCTGAATTAA AAGCGTTTAT TATTGATAAA AGTTATTCTG CTGAATTGGT CAGAGCGTTT GATGTGTTTG ATACCAGTGC GGGAGTGTTA AGTCTTGCAA AAGTACAAGC GGAGCGCGCC TGTGCCCATA CCGCGATAGA ACCTTGGTTA CGTTTACCTA AATCAGCGTT ATTATCTGAA TACGCGTTAT CTAATGACGA ATCGTTAATG GTGGTTAATG TTCATGCCAT CAATTTCACA TTAGGAATCG AAGATTATCA ACGCCAAATG AGTGATTTAG AAAAGGAAGT TAAAAATCAT GTTGGGCCAC TGATTTTGGC GGGTGATTTT AATTCTTGGA GTAGTGCTAG ATTAGAGGCA TTAGATCAAG AAGTGGCTCG CCTTAGATTA AAAGAAGTTC GGTTTACGCC TGATGAGCGA ATGATATTTA TGACAGGGTT ACCTTTGGAT CATGTTTTTT ATCGAGGTTT AAATGTAAAA GAAGCGCACT CAATAAAGAG TAACGCTTCT GATCATAATC CATTAGAAGT TAGTTTTAGC CTGAAAAGGC CGTAA
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Protein sequence | MKKKTIFIST VALLIGAMIM AKSFIFTIPL KPELIELTPD SMDYKTGCAE FDESKPIDRD GTINVLVWNI YKQQKQDWEP ALRKLTQKAD LVLLQEASLT PELKAFIIDK SYSAELVRAF DVFDTSAGVL SLAKVQAERA CAHTAIEPWL RLPKSALLSE YALSNDESLM VVNVHAINFT LGIEDYQRQM SDLEKEVKNH VGPLILAGDF NSWSSARLEA LDQEVARLRL KEVRFTPDER MIFMTGLPLD HVFYRGLNVK EAHSIKSNAS DHNPLEVSFS LKRP
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