Gene VSAL_I2304 details

Gene Information

• Locus tag: VSAL_I2304
• Symbol: fliJ
• ID: 6988542
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 2476388
• End bp: 2476825
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 643380582
• Product: flagellar biosynthesis chaperone
• Protein accession: YP_002263666
• Protein GI: 209695736
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2882] Flagellar biosynthesis chaperone
• TIGRFAM ID: [TIGR02473] flagellar export protein FliJ

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAGTG CCTTTGATTT TTTACTAGAA CAAGCTCAAG AAAGAGAGAA CCAATCGGTA 
CTGGCGTTAA ACAAAGCCAA GTCTGAATTG GATAATTTTT ATAAGCAAGT AAAACAAATT 
GAAAAATACC GTTTGGATTA CTGTAATCAG CTACTAGAAC GTGGTCAGAA AGGGTTAACT 
GCAAGCCAAT ACAGCCACCT AAATAAATTT CTTGTTCAGT TAGATGAAAC CCTAACAAAA 
CAAAAGAGTG CGGAATCTCA TTTCACTTCT CAAGTGGATA ACTGCCAAAC CTATTGGCAA 
GAAACCCGTA AGCAGCGTCG CTCTTATGAG TGGATGATGG ATAAGAAAAA AGCAGAAAAA 
CAAAAAATGC TGGATAAACA AGAACAAAAA ATGATGGATG AATACGTGAC GTTGCAATTT 
GCACGTAGGC CAAAATAG 

 

Protein sequence

MSSAFDFLLE QAQERENQSV LALNKAKSEL DNFYKQVKQI EKYRLDYCNQ LLERGQKGLT 
ASQYSHLNKF LVQLDETLTK QKSAESHFTS QVDNCQTYWQ ETRKQRRSYE WMMDKKKAEK 
QKMLDKQEQK MMDEYVTLQF ARRPK