| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2272 |
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| Symbol | vacJ |
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| ID | 6987694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2447622 |
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| End bp | 2448407 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380550 |
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| Product | lipoprotein VacJ precursor |
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| Protein accession | YP_002263634 |
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| Protein GI | 209695704 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00759989 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTATAAAA AAATATGTTT TTCTTGGGTG CTACTTTTTG TTATCACGGG GTGTTCTCAA
ACACCTGAGT CGATTGATCC TGAAATAGAA ACCAATGAGG CTGTCGAAGT TGAATACGAT
GACTCGCATG ATGGTGACCC AATTGAAGGG TTTAACCGAG TTATGTGGGA TCTTAACTAT
AATATTTTAG ACCCTTACTT AGTTCGTCCG GTATCTATTG CCTATGTTGA TTATACGCCA
AGCCCAATTC GAATCGGGAT CGCAAATTTC TTAGCGAACT TAGATGAACC CTCAAGCATG
GTAAATAATT TGATTATGGG GAATGGTGAG CAAGCAATGG TGAATTTCAA TCGATTTTGG
TTGAACACAA CACTAGGTCT TGTTGGACTT ATTGATATTG CCAGTGCTGC TGAGATTCAA
AAACCAGACA GTCGCTCTTT TGGGGATGCA TTAGGTTATT ATGGTGTCGG TAACGGGCCT
TACTTTATGT TACCTGGTTA TGGTCCATGG ACATTGCGTG AAGCTGGTGA TTTTGTTGAT
GGCTTATACA TGCCGTTATC GTATTTAAAC TTTTGGCAAG GTTTAGGTAA ATGGGGATTA
GAAGGCATGG AGTCACGAGT TGGTTTAATA TCTCAAGAGC CAATGCTAGA AACGTCACCC
GATCCCTACG TATTAACCCG TGATGTTTAT TTACAAAGAC AAGATTTTAA AGCAGAAATA
GAACCAGAAA GTGATAGTAA TTCAGAAGAA GACTTAAATG ACTTCTTAGA TGAAATTGAT
GAATAA
|
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| Protein sequence | MYKKICFSWV LLFVITGCSQ TPESIDPEIE TNEAVEVEYD DSHDGDPIEG FNRVMWDLNY
NILDPYLVRP VSIAYVDYTP SPIRIGIANF LANLDEPSSM VNNLIMGNGE QAMVNFNRFW
LNTTLGLVGL IDIASAAEIQ KPDSRSFGDA LGYYGVGNGP YFMLPGYGPW TLREAGDFVD
GLYMPLSYLN FWQGLGKWGL EGMESRVGLI SQEPMLETSP DPYVLTRDVY LQRQDFKAEI
EPESDSNSEE DLNDFLDEID E
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