| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2182 |
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| Symbol | |
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| ID | 6989209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2343403 |
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| End bp | 2344461 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380465 |
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| Product | outer membrane protein, porin |
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| Protein accession | YP_002263549 |
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| Protein GI | 209695620 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CACTTTTAGC ATTAGCGGTA CCAGCACTAC TTATGGCTGG CTCTGCATCA
GCAACAACGG TATACACAGC AGAAGATGGT TCGACAATTG ATGTATATAG CCGTTTAGGT
TTTAACATTA CTGACCGTGC AGGCATGGGT GAAGAGGGCG ATTCAGTTGG TAATTTTGAT
GCACGTATCG GTCTAGGTGG CTCTCAAGTC GTTAATGATA AAGTGTCTGT TATTGGTTGG
GCAGAATATC AAGTAAATGC GGCTGAAGCT CGCGGCAATG GCGATTGGTC ACCTCGTTAC
GTATGGGCGG GTATTGACGC TTCTGAAGCG GGTAAAGTGA CTTTTGGTCG TGTTGCTTCA
GGCATCATTA TGCTTTCTGA TTTAGGCGAT GTATTTGCGG CTTCTGATGT GGTTTTAGGT
CGTCAAATGG AGTTAGTTGA TAATTCAGCA GCTCAAACAT TCCGCCAAGA TGGCACTATT
CAATATCAAA ACAGTTTTGG TGCGTTTGAT ATGTCAGTTG CTTACATTTT AGGTAACTCA
GATTCAGACC AAGATGGTTC TTACAATGCA GTAGGTCGCT ACACATTTGA TTTAGGTAAC
GCGGGTACAT TAGCACCTGT TATAGCATAC CAAGCAAACA GTACCGGTGA AAACGCAGAT
AATCCAGATG CAGATTACAC ATTCTGGGGT GCGGGTCTTC AATACAAACT GAATGAATTA
ACGCTTGCTG CAATGTATAA CCAAGATGAA ATCGAAGGTG TGTACTCTGA TAAATCAACA
GATAAGAGCT ATGAATTAAC AGCGGTATAC AACATCAATG ATGATTGGAC AGCGCGCATG
GGCTACCGCT CATTAGAAAA CAGCGGTGGT GATGAAGCGG AATACAAAGA TACTACCTTT
GAAGTTCAAT ACCACTTAAC GGCTCGTTCT TCTATCTACA CAAGTTACGT GATGCGTAAC
GGTGAAAATG GCAAAGCAGT ACCTGCGAGC ACTAACGTGA TGAGCTGGAA CGACGCTGAA
GAAGATTACT ACCACTTAGG TCTTCGCTAT GAATTCTAA
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| Protein sequence | MKKTLLALAV PALLMAGSAS ATTVYTAEDG STIDVYSRLG FNITDRAGMG EEGDSVGNFD
ARIGLGGSQV VNDKVSVIGW AEYQVNAAEA RGNGDWSPRY VWAGIDASEA GKVTFGRVAS
GIIMLSDLGD VFAASDVVLG RQMELVDNSA AQTFRQDGTI QYQNSFGAFD MSVAYILGNS
DSDQDGSYNA VGRYTFDLGN AGTLAPVIAY QANSTGENAD NPDADYTFWG AGLQYKLNEL
TLAAMYNQDE IEGVYSDKST DKSYELTAVY NINDDWTARM GYRSLENSGG DEAEYKDTTF
EVQYHLTARS SIYTSYVMRN GENGKAVPAS TNVMSWNDAE EDYYHLGLRY EF
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