| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2135 |
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| Symbol | |
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| ID | 6987611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2285204 |
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| End bp | 2287408 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380417 |
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| Product | inner membrane protein |
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| Protein accession | YP_002263505 |
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| Protein GI | 209695576 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01666] hypothetical membrane protein, TIGR01666
[TIGR01667] integral membrane protein, YccS/YhfK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0318465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTTT CTCTTATAAA AAGTCATTTT GTGAATAGTC GTCAGCTTTT TCGTCAGTAC
TGGGCCAATA AAACCATTAA TTACAGTGTT CGTGTATTAC TTGCCTTAAT CGGTGCAGTG
ATCCCTTGCT GGTATCTTGG TGAAAATACC GCGATCACCC CATTAATTTT AGGGATTATT
GCTGCTGCAC TTGCTGAAAC CGAAGACAAA TTATCGGGAC GATTAAAAGC ACTTTTCTTT
ACGTTTATTT GCTTTGCTAT TGCAGCGTTC TCTATTGAAC TTTTATTTGA TACTCCGATA
CTTTTTGCGA TTGGTTTATT CTTATCCACC ATCAGCTTTA TTATGCTTGG GGCTTTAGGT
CCACGTTACG CCAGTATCGC TTTTGGATCA TTACTCATCG CTATTTACAC CATGTTAGGT
GCCGATCAAA GCCCTAATTT ATGGTATCAA CCGACCCTAT TGCTCGGTGG TGCCGCTTGG
TATTATTCCA TCTCTTTGAC GTGGCAAATA TTCTGGCCGT TGCAACCAGT TCAACAAAAT
TTAGCGACCG TCTTTGAAAC CATGGCTACG TATTTAAACA ATAAAAGTGA ACTCTTTCAC
CCTGTCACTA ATTTAACACC TCAACCTTAT CGCCTCCAAG AAGCCAAAAA TAATGCGCAA
ATGGTAACGG CATTAAACAA CAGCAAAACG TCATTATTAA CCCGAGCTAA ACGTGGTCAT
GTTGTTGGGG CAAGCGATCG ATTCTTAAAA ATTTATTTCA TTGCACAAGA CATTCATGAG
CGAGTTAGCT CAAGTCATTA TCGTTACCAA GACTTAGCAA ATACATTTAA TCGCAGTGAC
ATTCTTTTTC GCTTTAAGCA TCTTCTTCAC AACCAATCTT TAGCCTGTGA GGAAGTGGCT
CGTTGCTTAT CGTTAGGTTT GCCTTATCAA CACGCACAAA CTTCTATTTT CGCCTTGGAT
GAGTTACAAC AATCGCTGCT TGCATTAAAA GAACAACATC GACCGGAGTG GCGATTGTCG
TTAATTCAAT TGGATTATTT ATTTAATAAC CTTGCAACCG TTGAACGTCA ATTTGCCAAT
ATCAGTAACC CTGAACGTGC ATGTTTAGAA AATGAAGATG ACACAGTTCT GTCAGACCAA
GGCGCTCATA CTCCAAAAGC AATGTGGCAA CGACTGAGGG CGAATCTTAC ACCCGACTCC
ATGCTTTTTC GTCACGCGAT ACGTATGGCG ATTGCCCTAA CTGCGGGTTA TGGCATTATT
CAAGCATTCA ATTTAAATCA TGGGTATTGG ATTTTATTAA CCACATTGTT TGTCTGCCAA
CCAAACTACA GCGCAACAAA AGAAAAACTG GTCGCTCGTA TTGCTGGTAC GCTAATTGGT
TTAGTTGTCG GTACGTTACT ACTGGTTCTC TTTCCTTCAA TCGACAGCCA ATTAGTCTTG
ATGGTTATTG CGGGCGTGCT TTTCTTTGCA TTTAGATTAG CGAATTACGG GTTTGCCACT
GCCTTTATCA CGATCTTAGT CTTATTCTGC TTTAACCAAT TAGGTGAAGG CTATGCGGTG
ATACTTCCGC GTCTTGGTGA TACGATCGTA GGGTGTGCAT TAGCAGTAGT TGCGGTTACT
TACATACTTC CAGATTGGCA GTCAAAACGC TTGCATAAAG TCATGGCAGA CACGGTAACA
GCACATCAAG ATTACCTCTC AAATATCATT GCCCAATACC GCGCAGGGAA GAAAGACTCA
CTTCAATATC GTCTTTCTCG CCGCCAAGCA CACAATAATG AGGCCGCTTT AAGCTCTGCT
ATCAGTAACA TGCTCATTGA ACCCGGAAAA TACCAAACCG CGGTGGATGA ATCATTCCGA
TTTCTTTGTT TATGTCATGC GATGCTCAGC TATATTTCGG CTTTAGGTGC TCACCGAACT
CGTTTAAAGG ATGAAGAAAC ACATCAATTA GTTGCAGAGT CTCACCGTAT TATTCATTCT
CATTTGAACC AAATTCAATG CCAATTAAAC AATAAAGAAT TTAACGTTGA GAATAATATT
CGTAACGAGG AAGGGATTGA AAAACGTCTT TCAGAATGGC GTGATGAAGA TGAAAACTCA
GTCAGAATGG TCTTACAGCA GCTTCATTTA ATCCACCAAA TATTACCTGA AATGCATTCT
TTGTCAGAAA TATTAAGCAC CCCAAGTAAA CCTGAGTCAA AATAA
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| Protein sequence | MGFSLIKSHF VNSRQLFRQY WANKTINYSV RVLLALIGAV IPCWYLGENT AITPLILGII
AAALAETEDK LSGRLKALFF TFICFAIAAF SIELLFDTPI LFAIGLFLST ISFIMLGALG
PRYASIAFGS LLIAIYTMLG ADQSPNLWYQ PTLLLGGAAW YYSISLTWQI FWPLQPVQQN
LATVFETMAT YLNNKSELFH PVTNLTPQPY RLQEAKNNAQ MVTALNNSKT SLLTRAKRGH
VVGASDRFLK IYFIAQDIHE RVSSSHYRYQ DLANTFNRSD ILFRFKHLLH NQSLACEEVA
RCLSLGLPYQ HAQTSIFALD ELQQSLLALK EQHRPEWRLS LIQLDYLFNN LATVERQFAN
ISNPERACLE NEDDTVLSDQ GAHTPKAMWQ RLRANLTPDS MLFRHAIRMA IALTAGYGII
QAFNLNHGYW ILLTTLFVCQ PNYSATKEKL VARIAGTLIG LVVGTLLLVL FPSIDSQLVL
MVIAGVLFFA FRLANYGFAT AFITILVLFC FNQLGEGYAV ILPRLGDTIV GCALAVVAVT
YILPDWQSKR LHKVMADTVT AHQDYLSNII AQYRAGKKDS LQYRLSRRQA HNNEAALSSA
ISNMLIEPGK YQTAVDESFR FLCLCHAMLS YISALGAHRT RLKDEETHQL VAESHRIIHS
HLNQIQCQLN NKEFNVENNI RNEEGIEKRL SEWRDEDENS VRMVLQQLHL IHQILPEMHS
LSEILSTPSK PESK
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