| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2134 |
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| Symbol | helD |
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| ID | 6988802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2282975 |
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| End bp | 2285038 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380416 |
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| Product | DNA helicase IV |
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| Protein accession | YP_002263504 |
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| Protein GI | 209695575 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0277838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATTA AAGCAACCAC CTTCGCTCAA TGGTTAGTTC AGGGTGACTT TTATCAACTT
GAATTAGAGC CAGAGCAGCT GTTGTTTACC TCCCACAAAT ATCAAGTTTC TGTGCCGTTT
GATAAATGGA ACGGGCAAGT TACTTTCGAA CGAGGATTAG TGTGGGGAGC GCTTTGTTTC
TATAATCGAA ATGAACAAAT AGCGTGGCGA GTTTCTGGGT TGCCTTGGCA AGAGTGCGAC
GCGGTAATTA ATGCCGTATT AAACGCGTAC GCAGAATGGA AAGAATCGAA AGTCGTTATG
TTGAATCAGT TACAACCCCA GATGTTAGAA CTGGTGAGGA CGTTCAGTGC ACAGCGTCGT
TATTTGAAGC AAACCGAAGC GCTGTTGATG GTTGAGAAAT TATACGATTT ATTTGAGCAA
ACCAAGATAT CGATCCCTTT AGCTCAACAA CTTCAGCCTG AATGTATTGC GCCTGTATTA
GAGTGGTTAA TGGAACCTGA ACAACAACTT ATCACGTTAA ACGAAACGTG GTTAGAAGAG
CAAAAAGTGG AGTGGAAATC TTTTTTCTCA GAATGTGAAT CACAACCATT AAACGAATCA
CAGCAAAGTG CGCTGTTATT AAATGAAGAC CATACATTAG TATTAGCGGG AGCTGGCTCA
GGTAAAACAA GTGTACTTGT TGCTCGTGTT AATTATTTGA TTAAAAGCCA AGTGGCTCAA
CCTGAAGAGA TTTTATTATT GGCTTTTGGT CGTCAGGCCG CTCAAGAAAT GTCAGCTCGG
ATCATTGAGA AGCTAGGAAC TGATATTGGA CAAAAAGTAA AAGTGGCCAC GTTTCACCAA
TTAGGGTTGG ATATTATTCG TCATGTCGAA TACCAACAAC CCAAATTGTC ATGCTTGGTG
ACGGATTCAA AAGCAAGAAA AGAGTGGTTT AGCCATGTGT TAGATTCGGA GTGGAAAAAT
GCGACAGCAA CGAATCGTTG GAAAAAACAC TTAAAAAAAT GGCCTATCGC TTACTTACGT
GGTGATGTTG ATTTAAAAGA AGAATCGCAT AACGAAAAAT TACAAGAATG GCTGCACAAA
CAAGTATGTC AGTTAAACAG CTTACAGCTA GATAAAAAAA CAGTTACCGC CCGTATTGAA
AACCATGCTG ATGCGGCGCG TTTAAAAAGC GAGCTCAACA TTGTATGGCC ATTTTTTAAA
GCGTATGAAA GAACCCTTAA ACAAGAAGAC GCAATTGATT ATGATTTAAT GATAACCAAA
GCGACAGCCT ATATAAATGA GGGGAAATAC GCCTTACCGT GGTCATTTGT TATGGTTGAT
GAATATCAAG ATATCTCTCC GCAGCGTTTA GATTTAATTG AAGCTATTTG CCATAAAGAG
AATGATAAAA AAGAAAGAGC CACATTATTT GCGGTCGGTG ATGACTGGCA AGCGATTTAT
CGTTTTGCTG GTGCAGATGT ATCTCTAACT ACTGGGTTCG AACAACGTTT TCAATCTTGT
CAAATTGCAA ATTTATCAAT GACGTATCGT TTTAATGATC AAATTGGTGC CGTTGCTAAC
CGTTTTGTAC AAGAAAACCC GATGCAGCTT AAAAAAGAGC TGAACAGTTT CACAAAACAA
AAACGTAAAG CAGTGAAAGT GATTGAGCAC CAATCGATAG AAAAAGAATT ACTCTCTTTG
TCTAAAAATA TTCGTGATGG TGAGAAGGTT CTGATGTTAG GACGTAATTA TAATCACTGT
CCTGATGCTT TTGATGAGTG GGTGAAATTT TACCCAGGGT TAAACCTTGA ATACAAAACG
TGTCATGCAA GTAAAGGAAC TGAAGCTGAT TATGTCTTTA TTGTTGAAAT GACGGATGGT
CAATTCCCAA TGAAAGAGAG AGCGGAATCT TTAGATGGCG CATTGCTGCC ACACCTTGAA
GATTTTGCTT ATGCTGAAGA GCGTCGATTG TTTTATGTTG CGTTAACGCG AGCGAAGAAG
AAAGTGTGGA TAGTATATCA TGGAAAGGCA TCCCCATTTG TTCAAGAGAT TGTCGATAAA
GATTACCCCG TGATCCTTGA GTGA
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| Protein sequence | MQIKATTFAQ WLVQGDFYQL ELEPEQLLFT SHKYQVSVPF DKWNGQVTFE RGLVWGALCF
YNRNEQIAWR VSGLPWQECD AVINAVLNAY AEWKESKVVM LNQLQPQMLE LVRTFSAQRR
YLKQTEALLM VEKLYDLFEQ TKISIPLAQQ LQPECIAPVL EWLMEPEQQL ITLNETWLEE
QKVEWKSFFS ECESQPLNES QQSALLLNED HTLVLAGAGS GKTSVLVARV NYLIKSQVAQ
PEEILLLAFG RQAAQEMSAR IIEKLGTDIG QKVKVATFHQ LGLDIIRHVE YQQPKLSCLV
TDSKARKEWF SHVLDSEWKN ATATNRWKKH LKKWPIAYLR GDVDLKEESH NEKLQEWLHK
QVCQLNSLQL DKKTVTARIE NHADAARLKS ELNIVWPFFK AYERTLKQED AIDYDLMITK
ATAYINEGKY ALPWSFVMVD EYQDISPQRL DLIEAICHKE NDKKERATLF AVGDDWQAIY
RFAGADVSLT TGFEQRFQSC QIANLSMTYR FNDQIGAVAN RFVQENPMQL KKELNSFTKQ
KRKAVKVIEH QSIEKELLSL SKNIRDGEKV LMLGRNYNHC PDAFDEWVKF YPGLNLEYKT
CHASKGTEAD YVFIVEMTDG QFPMKERAES LDGALLPHLE DFAYAEERRL FYVALTRAKK
KVWIVYHGKA SPFVQEIVDK DYPVILE
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