Gene VSAL_I2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2101 
Symbol 
ID6987586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp2252081 
End bp2252641 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content40% 
IMG OID643380386 
Productmembrane protein 
Protein accessionYP_002263474 
Protein GI209695545 
COG category[S] Function unknown 
COG ID[COG4648] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.735256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTGGC TGACGGTATT GTCAGCCATT GCACTGCTTG CCTATCCGCT AGCGGTTTAC 
TACGGTCTTC ACTTTGGTGG AATTACGACA GTAGCAGGCG TGCTAGCGGT GTTGTTTTTA 
GTGCGAATGG TTGGTGGAAA ACAAGTTCCG ATTAAAGAGC TAAAATACAT AGCGATGATC 
AGTGGGGCTG CAGGGATAAT ACTTACGGGT TTAGGTTGGA TATTTCGATC TGAAGGGTGG 
TTCACTTTTT ATCCTGTGAT CGTCAATGTC GTCATGTTTT GTGTCTTCTT TTGGACTTTA 
TTTCAACCTC AAAGCATGAT TGAACGTTTT GCTCGTCTTC AAGAGCCTGA ATTACCACAA 
AGCGGTATCA AATACACAAG AACAGTGACG AAAGTTTGGT GTGTTTTTTT TGTTATTAAC 
GGCTCTATTT CTCTCACAAC TTGTTTTTTA GAGATGAAAG TGTGGATGCT GTATAACGGC 
TTTATTAGTT ATTTGCTTAT TGGAACATTA TTTGTGAGTG AGTGGTTAAT TCGCCAATGG 
ATAAAGAGAA AAGAAGCATG A
 
Protein sequence
MRWLTVLSAI ALLAYPLAVY YGLHFGGITT VAGVLAVLFL VRMVGGKQVP IKELKYIAMI 
SGAAGIILTG LGWIFRSEGW FTFYPVIVNV VMFCVFFWTL FQPQSMIERF ARLQEPELPQ 
SGIKYTRTVT KVWCVFFVIN GSISLTTCFL EMKVWMLYNG FISYLLIGTL FVSEWLIRQW 
IKRKEA