Gene VSAL_I2059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2059 
Symbol 
ID6987548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp2206485 
End bp2207171 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content38% 
IMG OID643380346 
Producttranscription regulator, GntR family 
Protein accessionYP_002263435 
Protein GI209695506 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATACC TTGCTATAAA AGACGCGATT GAAGAGCAAA TAGAAAGTGG AATGCTAGAA 
ATTGGGCATA AATTACCATC AGAAAGAACA CTAGCAGAAG CGTTTTCAAC GACTCGAATT 
ACGCTTCGTG AAGCACTTTA TCACTTAGAG TTATCGGGTA AAATATACCG AGAAGAACGT 
CGTGGATGGT TTGTTTCTTC GAAAGGGATC GTGTTAAATC CGATGGTCGA TTTAGATCTG 
GCTGTATTAT GTTCGAATCA AAAACGACGT TATATAAAAA CCACCCTCAA TGCACATAAA 
GTATTAGCAC CTAAAGCTAT TGCAAATGCG CTGCAATTGA CGCCTTTTTC TTATGTTCTT 
GCGTTGTCAT CTGTTATCTC TATTGATAGC AGAAAAGTGG CTATTCAATA TCAATATATC 
CCAGTAGAGC GTTTTCCTAA GTTGCAACAA CCTGAAAATG AACCCTCTAT AATGACTTAT 
TTGAAAGATC ACTATTTGTG TCAGGCTGAT TTGATAACAA TGAAAATAGG CGTTCAACCT 
GCGGAACTGA TTGAGTCAAC GGCATTGAAT ATTAGTAGTG GAAGCATGCT TTTTTCTGTG 
AAACAAACGG TTCATGATTC TCAAGGTAAG GCCTTTTTGT ACCAAGTGAC TAATTGGTGT 
CATGATGCGG TAAATATAGA AGGTTAA
 
Protein sequence
MQYLAIKDAI EEQIESGMLE IGHKLPSERT LAEAFSTTRI TLREALYHLE LSGKIYREER 
RGWFVSSKGI VLNPMVDLDL AVLCSNQKRR YIKTTLNAHK VLAPKAIANA LQLTPFSYVL 
ALSSVISIDS RKVAIQYQYI PVERFPKLQQ PENEPSIMTY LKDHYLCQAD LITMKIGVQP 
AELIESTALN ISSGSMLFSV KQTVHDSQGK AFLYQVTNWC HDAVNIEG