| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1896 |
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| Symbol | tolR |
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| ID | 6989306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2029999 |
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| End bp | 2030445 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380197 |
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| Product | TolR protein, membrane component |
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| Protein accession | YP_002263292 |
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| Protein GI | 209695363 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGGCT ATCAACCTAA AAAACGCAAG TTAACCGCTG AGATTAATGT TGTACCTTAT
ATTGACGTTA TGTTGGTATT GCTAATTATC TTTATGGTAA CGGCTCCTTT TGTGACTCAA
GGGGTAGACG TGAAATTACC AGAGATGACT AATGCGAAAT CAGCACAAGA AATGGCAGGT
GAAGATCCTA ATGCAACGTT TATTATTGTC GAGATTGATA AAGACGGAAA TCTAGGCTTA
AGTGTTGATA ATCAAGACGT ACGTCGTCCA ATGTCAATGC AAGAAATGAT AATGAACGTT
AAAGCAGAAC TAAGCATTAA GCCTAATTCT CCCGTCGCAG TTGGCGGGGA TGCCAGTACG
CCATATTCAG AGATAGTATT AGTTCTTGAT GAATTAAGCC GCGCAGGGGT AAGTAAAGTT
GGGTTACTTA CCGATCTCAA GGAATAG
|
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| Protein sequence | MSGYQPKKRK LTAEINVVPY IDVMLVLLII FMVTAPFVTQ GVDVKLPEMT NAKSAQEMAG
EDPNATFIIV EIDKDGNLGL SVDNQDVRRP MSMQEMIMNV KAELSIKPNS PVAVGGDAST
PYSEIVLVLD ELSRAGVSKV GLLTDLKE
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