| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1695 |
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| Symbol | |
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| ID | 6987305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1790585 |
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| End bp | 1792273 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380017 |
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| Product | hypothetical protein |
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| Protein accession | YP_002263117 |
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| Protein GI | 209695188 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGT GGGCTTCTCT TTTAACTTTA ATACAGGATG ACGGCACAGT AGTGTTATGT
TTTCCTGATA GCTTTCAGCC GGATGCTGAA CCCACCTTAA AAGGGTTTAA AGATTCTTTA
GAAGAGATTG GGGCATTGGA TTTTTTCTTT GATGAAAAAA TCATAATGAC GATCATTAAC
GATGTTAAAA GTGGCATCGT TGCTCATCAC CAAAATAGAA AAATTGCAGA ACGTCGTAAT
GCCGAAGTGT TTCTTGCTGT AGAAGAGCGC GATATGAAAG CAACGATGTC TGTTATTGGT
GCTTATGGTG GTCGAGATGT ACAAAGTACG GACATCATAA CGGCATTAAC CAGCATGGAA
GTGACTCGCG GTATCAGTCG AAATGCCTTA AAGAAAATAA TAGTACTAGG TCGAAACTTA
GCTGCTGGAG AGCGAATTTC TCAATTGGTC GCAAAAGGCA AAGAGCCTAT TGATGGTTCT
AACGCTATTT TTACTGCACT GGTTGAAGAT TTTCGTGAAC AAGTTTTACA GCCTCAAGAG
AAAGAGGGTG AAGAAGATAA AGTTGATATG CGCGATCTTG GTGAGACAAT CACGGTGGTT
GAAGGTGATG AATTAATCCG TCGAACGCCT CCCACAAAAG GCATTGATGG TTTTACTGTA
AAAGGTGAAG TGATTCATGC GACGGCAGGA AAAAACAGCA AATTACGAGC AGGAAAAGGT
GCGGGGATTT CTCCACAAGA TCCTGAATTG TTAATTGCAA CAACCTCTGG CATGCCTTGG
GTAAATGCAG AAGGTGCTGA AGTTGATAAT GCGCTTTGTT TAAATGCGGT TGATATCTCA
ACGGGTCATG TCAAATTTAA AGGGTGCGTA ATCATCAGTG GTGATATTGC ACCGGAGATG
ATTGTTAGAG CGACAGGCAG TATTACCGTT GGCGGGTTTA TTGAATCTGC AGATGTGCAA
GCTCATGGTG ATATTATTGC GATGAAAGGG ATCATTGGTC ATCAAGTAGA AGCGGGTGAG
GACTACTCTT GTTTTGTTAA AGCCGGTGGT AAAATAACGG CTAAGTTTGT TCAATCGGCT
AATTTACAAG CGTCTGGCGA TATTGAGTTA GGTTTACACG CCATTCAGAG TTTTATAAAA
AGTAAAAATG CAGTTTCCGT AATGGATAGC TCTGGGCGTA ATGGCTCTAT TGTTGGTGGA
GAGATTTATG CAGGTTCTAC AATTACAACG GTGAATCTTG GGGCTACCGC TGGCACTGAA
ACGTTAGTAA AAGCATTTAC ACGTTTTGAT AAGTACAAAG AAAACATTGC AGATTTAAAT
GCGAAATATA AAGCAGCGCA AGAAAACACA ATGAAAGTCG TTCGTGCTGA AATGGAGCTA
GCAAAGATCC CTAAATCAGA AAGAACAGAA GAACAGACAA TGCGTGTTAA AACGATGAAA
GAAGAATCAA GTAAAGAGAT TACACAATCA ATGACTCGAT TCCAATCAGC AGAAGAAGAG
CTAAGAAAGC AATTAGCAGA GAACGTTGTT AAAGTTACTG AGCGAGTGTA CCCAAGAGTG
ACCATTCAAT ACTCAGATGA ACAAGTCACA ACGAAACGTG AACATAGTCC ATGCAAAATA
TATTTTAATG AATATGAAAT TAAGATAGAT CCGATTATCT CAAAAAATCC CCATTTAATA
GACAGTTAA
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| Protein sequence | MNMWASLLTL IQDDGTVVLC FPDSFQPDAE PTLKGFKDSL EEIGALDFFF DEKIIMTIIN
DVKSGIVAHH QNRKIAERRN AEVFLAVEER DMKATMSVIG AYGGRDVQST DIITALTSME
VTRGISRNAL KKIIVLGRNL AAGERISQLV AKGKEPIDGS NAIFTALVED FREQVLQPQE
KEGEEDKVDM RDLGETITVV EGDELIRRTP PTKGIDGFTV KGEVIHATAG KNSKLRAGKG
AGISPQDPEL LIATTSGMPW VNAEGAEVDN ALCLNAVDIS TGHVKFKGCV IISGDIAPEM
IVRATGSITV GGFIESADVQ AHGDIIAMKG IIGHQVEAGE DYSCFVKAGG KITAKFVQSA
NLQASGDIEL GLHAIQSFIK SKNAVSVMDS SGRNGSIVGG EIYAGSTITT VNLGATAGTE
TLVKAFTRFD KYKENIADLN AKYKAAQENT MKVVRAEMEL AKIPKSERTE EQTMRVKTMK
EESSKEITQS MTRFQSAEEE LRKQLAENVV KVTERVYPRV TIQYSDEQVT TKREHSPCKI
YFNEYEIKID PIISKNPHLI DS
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