Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1594 |
Symbol | |
ID | 6987220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1701980 |
End bp | 1702384 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643379926 |
Product | putative NUDIX hydrolase |
Protein accession | YP_002263026 |
Protein GI | 209695097 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0307085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG TAATCGATAA ACTGGCTTGG ATTTACATTA AAGACGGTAA ATTTTTAACG GTTCGTTCAA AAGGTAAAGT GCTGTTTTAT CTTCCTGGTG GAAAGCGAGA ACTTGGCGAG AGTGATGAGC AGGCTTTAGT AAGAGAAATC AAAGAAGAAT TATCTGTCGA TCTTTGTCTT AATACGATTC ACTATGCGAA TACGTTTGTT GCCCAAGCTG ACGGAAAAGA AAGTGGCGTA TCAGTTCAAC TCACTTGTTA TTTTGCTGAA TTTACGGGCG AACTTGCCGC GGATGCTGAA ATTGAAGAGT TAAAATTTGT CGATCAAACG GATTTAAATG TGTGTTCATT AGCAACAGTG GTTACGATGG ACTGGCTTAT AGAAGAAAAT AGACTCACTG TATAA
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Protein sequence | MNKVIDKLAW IYIKDGKFLT VRSKGKVLFY LPGGKRELGE SDEQALVREI KEELSVDLCL NTIHYANTFV AQADGKESGV SVQLTCYFAE FTGELAADAE IEELKFVDQT DLNVCSLATV VTMDWLIEEN RLTV
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