Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1579 |
Symbol | |
ID | 6987212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1689051 |
End bp | 1689860 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643379911 |
Product | membrane protein |
Protein accession | YP_002263011 |
Protein GI | 209695082 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.247343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAC AACCGAAAGA AAAAACGTTT GTCCTTGGTG GTAGCATCGA AAAAGCCTTA TCAGGCGAAG TTGAATTAAG CCCTGTTAGT GTTATCCAAG AAGCTTGGAA AAATACGATT AAACATTTTT TTACTTTTTC TCCAGCAATT CTTTTGCTGA CGTTTTCTTA CATGGCAATT TTCTTTTTAG CTTTGCAAAT TCAGTTAGGT GATCCTGCTG TTTTGTTTAA GGCTATTTTA GGAGAAGTCG AATTAACATC TAAAATATCT TATGCCGCTT TTGTTGCAGG TTTAAGTGCT CAAGTTATTG TTTCTCCATT AACCGCTGGC GCCAGTTTGA TGGGGATGAG TCATGCCGCG GGAATAAAGT GTCCTACGCA ATATATATTT AAAGGTATTG CTTCTGCTGG AATGGTTGCA CTTGTCACTA TTTTATCTGA AGTATTCCAA GGAATGGTTA ATCTTTACCT TCCGTTAGTG GCTTTGTACT TATCGATGGC ATTTGGCTTT GCTATTTTAC TTGTCTGTGA AAAGAAAGTG ATGCCACTAA AAGCGTTGCT GCTTTCTTTT AGAGCAACAA ATAAGAAACT CGGCTCAATG CTGCTTATTC ATGTTGTTAT TATGCTGGCT CTTGTTTTTG GTATTGCGTT GTATGGTGTT GGTTTAATTG TTGTGATGCC GTTTATCTTC AATATTAAAG GCATTCTTTA TCGTAATATG TTTGGTATTA CGTTAAAAGT GATGGTTAAA AAAGACGATG AGGGCAACGG CCCAGATCAC CAAGTTCAAA ATAATATTTT TAACGCGTGA
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Protein sequence | MNEQPKEKTF VLGGSIEKAL SGEVELSPVS VIQEAWKNTI KHFFTFSPAI LLLTFSYMAI FFLALQIQLG DPAVLFKAIL GEVELTSKIS YAAFVAGLSA QVIVSPLTAG ASLMGMSHAA GIKCPTQYIF KGIASAGMVA LVTILSEVFQ GMVNLYLPLV ALYLSMAFGF AILLVCEKKV MPLKALLLSF RATNKKLGSM LLIHVVIMLA LVFGIALYGV GLIVVMPFIF NIKGILYRNM FGITLKVMVK KDDEGNGPDH QVQNNIFNA
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