| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1524 |
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| Symbol | |
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| ID | 6987170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1625550 |
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| End bp | 1626425 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643379859 |
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| Product | mechanosensitive ion channel |
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| Protein accession | YP_002262959 |
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| Protein GI | 209695030 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.288114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCGTT TATATGCACT TTTATTCTCC CTTTTTTTAG GGCAAACCGT CTTCGCCGAA
GATCTTCAAT CTATCGATAA TCTACAACAA TTTGCGAGTT TAATTCGTTG GAGTGGTGTC
GCTTTTTCTT TGTTTATCAT TATTGGCGCT TGGTTATTTC TTCGATTTAT TCAATCGATT
GTTGATGGAG TAAGTAGCCA ATTTGCACAA CGCCGAATGT TAATGCAAAA ATTGCAATCT
TTCTTTCAAT TCTTTATTTA TATGTCGACG GCGGTTGCTA TCTTTATGTT GAGTTTTAGG
GTTGATGATC GCGTACTTGC ACTCATTGGA GGAACGATTG CGGTATCCGT AGGTTTTGCA
TTAAAAGATT TAACCGCATC GTTCATTGCA GGGTTAACGG TTATGATAGA TCGTCCATTC
CAAGTAGGTG ACCGCGTCAC TTTTGAAGGG CACTATGGAG ACATTATTGC GATAGGTCTA
CGGTCAGTAC GAATGCAAAC ACTTAATGAT GATATTGTAA CGATACCGAA CAATAAATTC
TTAAATGACG TAACTGTGAG TGGAAATTAT GGTGGGATTG ACATGCAGGT TGTTATCCCT
TTTTATATTG GAATGGATCA GGATATTAAT AAGGCTCGAG ATATCATACA AGAGGCTGCA
TCTTCAAGTC GGTATATTCA CTTACCAAAA CCAGTTGTTG TTTTAGTTAA ACAAACGATT
ACAGAAAATT ATCTGGTGAT CCAACTTACG TGTAAAGCTT ATGTTGTTGA TATTAAATTA
GAAAAATTAT TCGAAACCGA TATTACTTTA CGTGTAATGC AAGAATTTAG AAAAGAAGAC
ATTATGCCTC CAACTATAGC AATTCAAAAG AAATAG
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| Protein sequence | MIRLYALLFS LFLGQTVFAE DLQSIDNLQQ FASLIRWSGV AFSLFIIIGA WLFLRFIQSI
VDGVSSQFAQ RRMLMQKLQS FFQFFIYMST AVAIFMLSFR VDDRVLALIG GTIAVSVGFA
LKDLTASFIA GLTVMIDRPF QVGDRVTFEG HYGDIIAIGL RSVRMQTLND DIVTIPNNKF
LNDVTVSGNY GGIDMQVVIP FYIGMDQDIN KARDIIQEAA SSSRYIHLPK PVVVLVKQTI
TENYLVIQLT CKAYVVDIKL EKLFETDITL RVMQEFRKED IMPPTIAIQK K
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