Gene VSAL_I1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1408 
Symbol 
ID6987064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp1524623 
End bp1525201 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content37% 
IMG OID643379761 
Productmembrane protein 
Protein accessionYP_002262861 
Protein GI209694932 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGTT CAGTCGCATT ATTTATGGGT GCATTGTTAG ATGCACTCAT TGGGCCAAAT 
ATATTCGTTC CTGGTGAACC TTTTTTAATC GCAGCAGGTT ATCAACTTCA TCAGGGGATG 
ATGGGTGGGG TAATCGCGGT GTTATTAGGT GGTTTGCTTG GAGACCAATT AAGTTATTTT 
ATTGGAAAAG GTTATGGCCG TAAGGCTCAA CACTCACTGA TTAAATGGAA ACCTAAAACT 
CGTCGTTTAT TGGCTCGTTG TCGATTTCTT TTACAGACAA GAGGTAATGT TGTGTTGATG 
TTTGCTCGAC TATTAGGGCC AATTGCATGG TTTGTCCCTT TTGTCGCTGG TGTAAATCAG 
ATTCAATGGC GTCGTTTTTC TCTTTTTTCA AGTATCGGAT TATGTTTAGG GGTAGGGCAG 
TTTATTTTTT TTGGTTACGC CTTATCTTAT GGTTTAGATA AATTCCCATG GTTAATCGAA 
AGTAAGATTC TCATCATAGA ATATCGTTAT TCTATTACGG CTGTTTTTAT TTTTGGTGTT 
TTTTTATTGA TGACGAAAAA ATTAAGATGG AAAAAATAG
 
Protein sequence
MSGSVALFMG ALLDALIGPN IFVPGEPFLI AAGYQLHQGM MGGVIAVLLG GLLGDQLSYF 
IGKGYGRKAQ HSLIKWKPKT RRLLARCRFL LQTRGNVVLM FARLLGPIAW FVPFVAGVNQ 
IQWRRFSLFS SIGLCLGVGQ FIFFGYALSY GLDKFPWLIE SKILIIEYRY SITAVFIFGV 
FLLMTKKLRW KK