Gene VSAL_I1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1403 
Symbol 
ID6987059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1520143 
End bp1522170 
Gene Length2028 bp 
Protein Length675 aa 
Translation table11 
GC content39% 
IMG OID643379756 
Productsignal transduction protein, histidine kinase 
Protein accessionYP_002262856 
Protein GI209694927 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTAT CGCCATCACT TTGGAAGCGT CGTATAAAAA CCATGGTGCG CTATCGTCTA 
TTGTGGCTTA ACTCTGTGCC TTTATTTTTG ACAATGCTTG CTCTTATTAT CATTACGGCA
TTTTGGTCAA TTCATTACAC ATGGCAGAAT GCCTTAAATG ATGTAGGCAG TAAACTTTCT
GTTGCGAATA ACAGTATTGA ACTTTTGCAG AGAGAACAAA GTGCAGAGTT AGGTGGTTTT
GTTGATTCTT ATGCCTTTCA AATTAAATTG AAAAATGGGC AAGATTATAT ACAGCGCTGG
TCAAGTAATC AGGCAGCTAA ATATCATGCT GACTTTATTT CATTACATCC TGCCAATTAC
GCAAAAAAGT TACCTGAGAC ATTAGAAAGG CAAATGTACC TTGGTCGATC TCGGACGTTT
TTCCAAGTGA TGGATGAGAC CGCTTTAGTT GAAATTGATG AAGATCTGCC TAAGCGTGTC
AGTATTAGAA ACAAAGATAA CAACATTATT GAAACGAGAG GGCTGATCAG TCGAACACTG
ATCCCTATTT TCAATGAGCA TGGCAGCTTA GAGTGGATAG TAGACAGTGG GATTATCCTG
AATAACAGCA CATCCTTGGT TGATAGAATT AGAGATCTTA TTTATCCTGA AGGTAAGGGA
GCCACAGAGC AAGTTGGTAC GGTGACCTTA TTTTTAGATG ATTTGAGGAT CAGTACGAAT
GTGTTTACGG ATGATATATC AGGACAAGAA CGCGCGATTG GTACTGAAGT CTCACCAGAG
GTAAAACATC AAGTCATTGA AAATGGTGAA CGTTGGGTCA ATAGAGCATA CGTCTATAAT
GATTGGTATA TTTCGGCATA CAAACCCATT ACTGATCTTA ATGGGAATGT TGTTGGGATG
TTGTATACCG GGTATCTAGA ATGGCCATTA TTAAAACAAT ACATCTATAA CCTGTTGCAA
GCGGGCATCA CGATTCTTAT CACACTCTTA TTATCGACTA TTTTTGTTCA TCGTGGGGCG
AGAGATCTTT TCCAACCAAT TGAAAGAATA CACTATGTAG TAAAATCCGT TCAACTTGGA
AAGAATGACC GAATAGGCGA TCTTGGTCTT GATAATGGGC ATGAATTGGC CAGTTTGGCG
CAGCAATTTG ATAATATGCT CGATCAATTG CAATTACGAA ACAGCCAAAT TCAACGAGCA
TCAAAAGAGC TTGAATCAAA GGTTGAATCA AGAACCGCCA GTTTGCATGA AAAAACCATT
GAGCTTGAGC AATACATTAA GCTATTAAAG CAAGCTCAAG ATAAATTGAT CATGAGTGAA
AAACTGGCCT CATTAGGGGA GTTAACCGCG GGCATTGCCC ATGAGATTAA TAACCCAACG
GCTGTGATAT TAGGAAATGC AGAGCTGATC AAGTATGAGC TCGGTGATAA TGCAAGCGTA
GTATCGGAAG AGTTAGATGC CATCATGGAA CAAATTGATC GCATTCGTAA TATTACTCGA
AGTCTACTTC AATACAGCCG TCAGGGAGGG ATTCAAGATG AGGTTACTTG GCAATACATT
AATCCTATTA TTGAAGAAAG CGTCACTCTG GTACGAACTG GTGCACATAA GCGGGATATT
GACGTTGAGT TTGATTTCGA ACAACCCCCA AGAGTTGAAG TAAACAGACA TCACTTATTG
CAAGTATTAG TCAACTTACA GATGAACGGT ATTCATGCAA TGAAGGCAAA AGGTAAACTC
ATTATTCGAA GCAGAACGTG GCAAGAAGAA GAGATAAACT TGGGGGCGAT AATTGAAGTT
GAAGATTTTG GTTCTGGTAT GAGCCATGAA CAATTAGGAC GAATTTTCGA TCCTTTTTAT
ACGACTAAGC GTGATGGTAC TGGGCTTGGA TTATCTGTTT CTCAAAGTTT ATTAAGCCAA
ACGGGAGGGG AGATTAAAGT ACGATCTCAA CTTGGTGAAG GGACTGTATT TACGATTTAT
CTACCAACCA AATCAGAACA TTATCCATAT GATAATTTGA TCGGTTAA
 
Protein sequence
MMLSPSLWKR RIKTMVRYRL LWLNSVPLFL TMLALIIITA FWSIHYTWQN ALNDVGSKLS 
VANNSIELLQ REQSAELGGF VDSYAFQIKL KNGQDYIQRW SSNQAAKYHA DFISLHPANY
AKKLPETLER QMYLGRSRTF FQVMDETALV EIDEDLPKRV SIRNKDNNII ETRGLISRTL
IPIFNEHGSL EWIVDSGIIL NNSTSLVDRI RDLIYPEGKG ATEQVGTVTL FLDDLRISTN
VFTDDISGQE RAIGTEVSPE VKHQVIENGE RWVNRAYVYN DWYISAYKPI TDLNGNVVGM
LYTGYLEWPL LKQYIYNLLQ AGITILITLL LSTIFVHRGA RDLFQPIERI HYVVKSVQLG
KNDRIGDLGL DNGHELASLA QQFDNMLDQL QLRNSQIQRA SKELESKVES RTASLHEKTI
ELEQYIKLLK QAQDKLIMSE KLASLGELTA GIAHEINNPT AVILGNAELI KYELGDNASV
VSEELDAIME QIDRIRNITR SLLQYSRQGG IQDEVTWQYI NPIIEESVTL VRTGAHKRDI
DVEFDFEQPP RVEVNRHHLL QVLVNLQMNG IHAMKAKGKL IIRSRTWQEE EINLGAIIEV
EDFGSGMSHE QLGRIFDPFY TTKRDGTGLG LSVSQSLLSQ TGGEIKVRSQ LGEGTVFTIY
LPTKSEHYPY DNLIG