| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1331 |
|---|
| Symbol | |
|---|
| ID | 6987008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 1443279 |
|---|
| End bp | 1444295 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643379691 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002262790 |
|---|
| Protein GI | 209694862 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2374] Predicted extracellular nuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTAACGA TTGAGAGCAT CACTTTTACG ACAATCAATA TGTTCAACTT TGTTGAGCCG
CCCAATGCGT ATTACGATTT TGAAAACATC CTGACCCAAG AGGAATGGCA AAAGAAACAA
GACTGGTTTA AAAATAGAAT AACCACGTTA AACTCTGATG TGATTGGTTT TCAAGAAGTG
TTTAGCCCTG AAGCCCTTGA AGCATTAGTT AACTCATTAG GCTATCCGTA TTTTTGTACG
GTAGATGAAC CAAAATCAGA AGATGGGTAT GTATTTCATT CTCCCGTTGT GGCGTTTGCG
TCACGCTACC CGATTGTGAG TTCTCAGCCT GTTATTGCAA AATCAGAACA ACTGGCTCGA
TTCGGAATTG AGTTTGAATT TAATAGAGTG CCTGTTCACG CCAGTATCGA TCTACCACAC
CTTGGGGTCA CTGATTGTTA TGTGGTGCAC TTTAAGTCTC AACGACCAAA AGATCCGATA
GAGATAGATG GTATTGAAGA ACCAGAATCT ACCCCGCTTA CTCAACTGCA TGATGAGCAA
TTAGGTTCAT GGCTTTCGTC TGCTCAACGT GGATTGGAAG CCAATACCCT TCATCAGTAC
ATTACGACTC AAAGAAAGAA ATCGTCTCAA CCCGTTGTGT TAATGGGCGA TTTTAATAAA
CCTTTATTTC ATAATGAATT TATCGGCTTA CTCTCTCATC AACTAAGATA CGATAAATTT
AGCACTGATT ATCTCACCAC CTTTCAGTTA AAAGACAGCT GGGATATATA CAGCCAATTA
AAGGGAACGG ATTTATTAGA AGAACGCGTC AGTACTCATT ATTATGGCGC GAAAGGCTCA
GTATTGGACT ACATTCTATT ATCGAATGAG TTTGATAGCT CTTACTCTGG CAGTTTGTTA
GAAGTCACTG AGTATCGTGT TGTCGACCTG CATATCGTGA ACCCTAGATT CGACATCGAC
CAATTCAGTA CCGATCATGC TTTGGTTTCT ATTACAGCCC GTATTCGACA GGCATAA
|
|---|
| Protein sequence | MLTIESITFT TINMFNFVEP PNAYYDFENI LTQEEWQKKQ DWFKNRITTL NSDVIGFQEV
FSPEALEALV NSLGYPYFCT VDEPKSEDGY VFHSPVVAFA SRYPIVSSQP VIAKSEQLAR
FGIEFEFNRV PVHASIDLPH LGVTDCYVVH FKSQRPKDPI EIDGIEEPES TPLTQLHDEQ
LGSWLSSAQR GLEANTLHQY ITTQRKKSSQ PVVLMGDFNK PLFHNEFIGL LSHQLRYDKF
STDYLTTFQL KDSWDIYSQL KGTDLLEERV STHYYGAKGS VLDYILLSNE FDSSYSGSLL
EVTEYRVVDL HIVNPRFDID QFSTDHALVS ITARIRQA
|
|---|
| |