| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1289 |
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| Symbol | |
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| ID | 6986969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1398517 |
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| End bp | 1399893 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643379653 |
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| Product | alkaline-resistant alpha-amylase precursor |
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| Protein accession | YP_002262752 |
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| Protein GI | 209694824 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00644344 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGG GAATGGCGGG ACAATTACAT AATATACCCG CAGTAAGTAA TGTCATTCTT
CATGCGTTCG ACTGGACCTA TCAAAGCATT GCTGAACAAG CAGAGCAGAT TGCCGCATTA
GGGTATCGTT CTGTGTTGGT TTCCCCTGCA ATGAAATCAC TTCAATTACC CTCGGGTACT
CAGTGGTGGC AGCGCTATCA ACCTCAAGAC TATCGTTTGA TTGATAATCC ATTAGGCAAT
ACCTCTGATT TTAAACATAT GATAGAGCGT CTTGCTGAAT TTAATTTATG GGTTTATGTC
GATGTTGTGT TTAATCACAT GGCAAACGAA TCAGACATTC GAGCGGATCT TCAATACCCA
AATCGATGGG ATAGAGAGGA TTACGAAAAA GACCCGATAA AATATCACGC GTTAACGCTG
TTTGGTGATC TCTCTGAACC TCTTTTTACT GAACCTGATT TTGTTGATGC TTTTGGTATT
GAGAATTGGA ATGATAAATG GGAAGTTCAA AATGGCCGCA TATCTGGGGG ACCTCATGAT
CCAGGTTTAC CTACCTTAAT TGATAATGAA CATGTTGTTG AGCAACAGCG TGCTTATTTA
TTGGCATTGA AGTCGATGGG AGTAAAAGGT TTTCGTATTG ATGCAGCAAA GCACATGAGC
CTTGAACACC TAAATAAAGT ATGGACTGAC GATATAACCA ATGATGTACA TATCTTTGGT
GAGATAATTA CTGACGGTGG AGCAACAAAA GAAGAGTATG AGACGTTTTT AAGTCCCTAT
TTAATGGGAA CCACGTTAGG TGCTTACGAC TTTCCTTTAT TTAATATTCT TTATCAAGCG
TTTGAGAAAA AAGGGTCGTT AACGTCATTA ATCGATCCTT ATTGCTATGG CTTGGCTTTG
TCTCCTTTAC GTGCGATTAC TTTTGCCATT ACTCATGATA TTCCGAATAA CCAAGTATTT
AAAAGTTTGG TGATGAGTGA GCATAACGAG TGGTTAGCTT ATGCGTATTT ATTTGGTAGA
GAAGGGGGGA TCCCGTTGGT TTATTCGGAT TTAGATACCA GTGGTATCAC TAATTCATTT
GGTTCCCCAC GCTGGAAAAA CGCATGGAAA GAAGAAAAAA TGTCAGGATT GATTCATTTT
CATCATCGTA TGTATGGAGA AGGGCAAACT TTGATTGAAG CGAGTGACGA TCATCTTGTT
TTTGCACGAG GAGATCAAGG TATTGTGGCG TTAAATAAAT CGAACAAGAA TATTGAAGTG
AGTATGTCAT CGGACAGTGA GTGGAGAGAG TTTTCATCCA ATCAATTGTG TCAGAAAAAA
GAAGGCGTAC TTGTGTTTAG TATTCCTAAA TATTCTTATC TTTTATTGTG TCATTAA
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| Protein sequence | MSQGMAGQLH NIPAVSNVIL HAFDWTYQSI AEQAEQIAAL GYRSVLVSPA MKSLQLPSGT
QWWQRYQPQD YRLIDNPLGN TSDFKHMIER LAEFNLWVYV DVVFNHMANE SDIRADLQYP
NRWDREDYEK DPIKYHALTL FGDLSEPLFT EPDFVDAFGI ENWNDKWEVQ NGRISGGPHD
PGLPTLIDNE HVVEQQRAYL LALKSMGVKG FRIDAAKHMS LEHLNKVWTD DITNDVHIFG
EIITDGGATK EEYETFLSPY LMGTTLGAYD FPLFNILYQA FEKKGSLTSL IDPYCYGLAL
SPLRAITFAI THDIPNNQVF KSLVMSEHNE WLAYAYLFGR EGGIPLVYSD LDTSGITNSF
GSPRWKNAWK EEKMSGLIHF HHRMYGEGQT LIEASDDHLV FARGDQGIVA LNKSNKNIEV
SMSSDSEWRE FSSNQLCQKK EGVLVFSIPK YSYLLLCH
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