| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1284 |
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| Symbol | |
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| ID | 6986964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1394217 |
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| End bp | 1394594 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643379648 |
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| Product | hypothetical protein |
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| Protein accession | YP_002262747 |
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| Protein GI | 209694819 |
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| COG category | [K] Transcription |
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| COG ID | [COG5499] Predicted transcription regulator containing HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.520317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTA AGCCAATTAG AACTAAAGAT GATTACAAAG CAGCTATGGC TCGTATCAGT
GAGCTTACTA GCGGCGATCC TGATGCATTA CCTGATATTG AGTTTGATGA ATTAGAAATT
TTAACCACTT TAGTTGAAGC ATACGAAAAC GTTCATTATA AAATTGAAGC ACCAGATCCA
GTAGAAGCAA TTAAATTCAG AATGGAACAG CTTGGGTTAA GTGATAGTGA CTTAACACCA
ATATTAGGGC AACGCAGCCG AGTTACTGAG ATTTTAAAAA GAAAGAGACG ACTTTCACTC
ACCATGATTA GAAGCTTAAA TAGTAAGTTG AACATTCCAC TTGAGAGTCT TATTGGCGAA
TATCAACTTG CTAAATAA
|
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| Protein sequence | MNIKPIRTKD DYKAAMARIS ELTSGDPDAL PDIEFDELEI LTTLVEAYEN VHYKIEAPDP
VEAIKFRMEQ LGLSDSDLTP ILGQRSRVTE ILKRKRRLSL TMIRSLNSKL NIPLESLIGE
YQLAK
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