| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1259 |
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| Symbol | |
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| ID | 6986941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1368340 |
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| End bp | 1369143 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643379629 |
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| Product | HTH-type transcription regulator, RpiR family |
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| Protein accession | YP_002262728 |
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| Protein GI | 209694800 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATTT TAGAAAAGAT ACAAAATCAG AGAAGCAATT TGTCAGCCAA TGGCATTAAA
ATTTTAGATT TTATACTAGA ACAGCCTGCG GCAATCGGTG CCTACTCTAG CCAAGAATTG
GCAAATAGAG TTCAAGTTTC TCAATCTAGC ATCATTAAGC TAACGCAAAA ATTGGGCTTT
AAAGGATTCA CTGCTTTTAA ATTGGCCATA ATTGAAGACA TAGGAAGAAA GCACGCCATC
CTCGAACCAG AAAAGCCAAT CCACAATAAA ATCCACAGTG ATGATTCTTC ATTAACAATG
GCTCAAAAAC TGGTTCAAGA AAAACACCAC GCCTTAGTTG CTACCACCAA CGCCATTGAT
TACCAAGAGT TTGAACACAT TATCTCGTTA TTAAACAATG CTAACCGAAT TCAAATTATT
GGTATTGGAG GATCCGCATT AACCGCAAAA GATCTGTCCT TTAAATTACT AAAGATTGGA
ATGACAGCGT TATCAGAACA AGACAGTCAT GTCCAAATCG CTACCGCGAA TACGCTATCA
AACACAGATG TACAAATGGC AATAGAAAAA GGAGCGACGG TTATTGCCCT TACCTCTACG
AAGAAAAGTC CATTAAGGAA AGTCGCAAGC TATTGTATTG ATACCATTGC AGATGAACGT
CAGTTTCGCA GTTCATCCAT TTCATCTCGT ACGGCACAAA ACGTCATTAC CGATTTAATT
TTTATGACCT TATTTCAATT AAGAAGTGAC AGTGCCAAAT TGCTTATCGA TAAAATCTCA
TCGACTATCG ACAGCATTAG ATAA
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| Protein sequence | MSILEKIQNQ RSNLSANGIK ILDFILEQPA AIGAYSSQEL ANRVQVSQSS IIKLTQKLGF
KGFTAFKLAI IEDIGRKHAI LEPEKPIHNK IHSDDSSLTM AQKLVQEKHH ALVATTNAID
YQEFEHIISL LNNANRIQII GIGGSALTAK DLSFKLLKIG MTALSEQDSH VQIATANTLS
NTDVQMAIEK GATVIALTST KKSPLRKVAS YCIDTIADER QFRSSSISSR TAQNVITDLI
FMTLFQLRSD SAKLLIDKIS STIDSIR
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