| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1252 |
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| Symbol | |
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| ID | 6986935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1359896 |
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| End bp | 1360810 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643379623 |
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| Product | HTH-type transcriptional regulator, LysR family |
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| Protein accession | YP_002262722 |
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| Protein GI | 209694794 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.648754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCATTA ATCATAAAAA TATTCCTTCT CTGAGTTGCC TAATTGTATT TGAAGCAGCT
TCTAGGTTAG GAACGTTGAC TAAAGCGGCT GATGAATTAT GTGTCACCCC TACAGCGGTT
AGTAAGCAAA TAAAAAAGTT AGAAGCCTTT TTAAATACTC AGTTATTCAC TCGCGGTAAA
CAAGGTGTAG AGCTAACCCC TAAAGGCGCA CTTTATTTAA ACAGTGTGAT TGAAGCGTTA
GAGATACTAT CAAGTCAGCG CATACCAATG GATGATGAAC ATAACCCCCT CCCCCTAAAT
ATAGAAATAG GAACGTGTTT TTCTCACTTT TGGTTGCTGC CTAAATTGGA TGATTTTCGT
AATAAATACC CCGAGATCAC ATTGAATTTA GTGATTAATA ATGACAGGAA CATTGGCGAT
AATGCGGATT ATGATATGGC CTTTTTCTAT TCATCTATGG ATTCAATCAA TAAAAATAAT
CATTTACTCT TTGCTGAGAA AGTCCTACTC GTATGCAGTC CCGATTTTCT AAAAAAACGA
CCTGAATGTA CTGATTTATC TCAGCTTTGG CAGCAGCCTG TTATTATGCT GAAAGAGACC
TTATCATTTT GGGAAGATTG GCAATCGTGG GCTGATGTGT ATGGAATCGA ATACCAACCG
CCTCAAAATG TTATTCAAGT TGAGGATCAA GTTTCCGTTA TTCAAGCCGC GGTTAATGAT
GCGGGAATTG CACTAGCTTG GGATTGGCAT GTAAGGGAAT TAATAGAACA AGGGAGGTTG
GTTGCGTTAA CCAAGCCGGT TGAATTTAAC ACGAATGCCT TCTTTTTATC GGTTTCAGAA
GACAGTGATC ATTTCGCTTC TCAACTCTTT GTAGATTGGA TTATTTCTAC TGAACGTGCC
TATTTGAATT CATAA
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| Protein sequence | MAINHKNIPS LSCLIVFEAA SRLGTLTKAA DELCVTPTAV SKQIKKLEAF LNTQLFTRGK
QGVELTPKGA LYLNSVIEAL EILSSQRIPM DDEHNPLPLN IEIGTCFSHF WLLPKLDDFR
NKYPEITLNL VINNDRNIGD NADYDMAFFY SSMDSINKNN HLLFAEKVLL VCSPDFLKKR
PECTDLSQLW QQPVIMLKET LSFWEDWQSW ADVYGIEYQP PQNVIQVEDQ VSVIQAAVND
AGIALAWDWH VRELIEQGRL VALTKPVEFN TNAFFLSVSE DSDHFASQLF VDWIISTERA
YLNS
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