Gene VSAL_I1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1249 
Symbol 
ID6986932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1357404 
End bp1357871 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content40% 
IMG OID643379620 
Productmembrane protein 
Protein accessionYP_002262719 
Protein GI209694791 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.171454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTCAA AATTAGAACT GAGAGTTCCG CCCCCGTTAG TCATGTTGTT GTTTATGGCA 
ACTGTGTTCG TTTTTGACTA CCTTGCTCCT TTTAACCTGT TTTACTTGCC TTGGTTGAGC
TACGTTCTTG TTCTCAGTTT GATTACTTTA GGTGGGGGAA TTGCGTTGTG CGGAGTAAAA
GAATTTCGAG AGGCAAAAAC AACGGTTAAT CCACTTAAAC CAGAAAGCAG TTCTTCATTA
GTGAGCTCTG GTATTTATCA ATACACTCGT AATCCTATGT ACCTTGGGCT ACTACTGGCT
TTGTTGAGTA GTGTTGCTTA TACCCAACAT CCACTTGGTT TAGTGAGTGC GTTAGGTTTT
GTTCTTTATA TGAATCGTTT TCAAATTGAA CCAGAAGAAA AAATGCTGGT TAAATTGTTT
GGTGAGGACT TTAAAGTGTA TGCCAATCAG GTGAAGCGTT GGTTTTAA
 
Protein sequence
MRSKLELRVP PPLVMLLFMA TVFVFDYLAP FNLFYLPWLS YVLVLSLITL GGGIALCGVK 
EFREAKTTVN PLKPESSSSL VSSGIYQYTR NPMYLGLLLA LLSSVAYTQH PLGLVSALGF
VLYMNRFQIE PEEKMLVKLF GEDFKVYANQ VKRWF