Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1249 |
Symbol | |
ID | 6986932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1357404 |
End bp | 1357871 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643379620 |
Product | membrane protein |
Protein accession | YP_002262719 |
Protein GI | 209694791 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.171454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTCAA AATTAGAACT GAGAGTTCCG CCCCCGTTAG TCATGTTGTT GTTTATGGCA ACTGTGTTCG TTTTTGACTA CCTTGCTCCT TTTAACCTGT TTTACTTGCC TTGGTTGAGC TACGTTCTTG TTCTCAGTTT GATTACTTTA GGTGGGGGAA TTGCGTTGTG CGGAGTAAAA GAATTTCGAG AGGCAAAAAC AACGGTTAAT CCACTTAAAC CAGAAAGCAG TTCTTCATTA GTGAGCTCTG GTATTTATCA ATACACTCGT AATCCTATGT ACCTTGGGCT ACTACTGGCT TTGTTGAGTA GTGTTGCTTA TACCCAACAT CCACTTGGTT TAGTGAGTGC GTTAGGTTTT GTTCTTTATA TGAATCGTTT TCAAATTGAA CCAGAAGAAA AAATGCTGGT TAAATTGTTT GGTGAGGACT TTAAAGTGTA TGCCAATCAG GTGAAGCGTT GGTTTTAA
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Protein sequence | MRSKLELRVP PPLVMLLFMA TVFVFDYLAP FNLFYLPWLS YVLVLSLITL GGGIALCGVK EFREAKTTVN PLKPESSSSL VSSGIYQYTR NPMYLGLLLA LLSSVAYTQH PLGLVSALGF VLYMNRFQIE PEEKMLVKLF GEDFKVYANQ VKRWF
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