| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1199 |
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| Symbol | |
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| ID | 6986888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1308200 |
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| End bp | 1309102 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379574 |
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| Product | HTH-type transcriptional regulator, LysR-family |
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| Protein accession | YP_002262673 |
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| Protein GI | 209694745 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCAGC TAGAAAGTAT GCACATTTTT ACCAAGGTGG TAGAAGCAGG AGGAATAACA
AAAGCGGCGG AACAGTTAAA TTTGGCGAAA TCGGCCGTCA GTAAACGACT GAGTGAATTA
GAGCAACAAC TTGGTATTAA GCTCATCAAT CGAACGACTC GTACTTCTAG TCTTACCGAA
GCAGGGCAAT CTTATTTCAT AAAATGTAAA TTAATACTTG AGGAAGTAAA CGATCTTAAC
TGCCATGTGT CAGCCATTCA TCAAGAATTA AATGGCACCA TAAAACTCGC CGTTCCCCTC
ACCTTTGGTG TGATGCATTT GGTTCCTGCC TTAGATGATT TTGCAAAAGC ACACCCTAAA
TTGAAACTGG ATATTGATTT CTCTGATCGC AAAGTCGATT TGGTTGAAGA AGGTATCGAT
TTAGCGATTC GTATTGGTAA TCTCACAAGC TCAACACTGC AAGCTAAAGC CATTGCCCCT
ATTCATCACG TGTTATGTGC AAGTCCTGCT TATTTAGCTG AACATGGCAA TCCATCCACT
CCTGACGCAC TTAAATCACA TCAGCTATTA AGATACCGTC AACAGCCTTT ATCTGGTGTT
GAATTACGTG ATAATAAAAA TCAAGCGATG ACGGTTCCAA TGGAAACACA TTGTATTGCG
AATAATGGAG ACTTCTTAAA AGCGATGGCG GTCTCTGGGC ATGGGATTAT TTTTATGCCG
ACCTTTATTG TTTGGGAGGA GCTTGCGAAG GGAACGTTGC TGCCTATCAT GAACGATTAT
CACTTCAACT CAGTACACGC TTATGCTCTT TATCCTGAAA CCCGATATCT TCCTCAAAAA
GTACGTAAAT TGATCGACTT TTTAAGTGCT TATTTTGGGA ATGAGCCTTA TTGGGATAAG
TAA
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| Protein sequence | MGQLESMHIF TKVVEAGGIT KAAEQLNLAK SAVSKRLSEL EQQLGIKLIN RTTRTSSLTE
AGQSYFIKCK LILEEVNDLN CHVSAIHQEL NGTIKLAVPL TFGVMHLVPA LDDFAKAHPK
LKLDIDFSDR KVDLVEEGID LAIRIGNLTS STLQAKAIAP IHHVLCASPA YLAEHGNPST
PDALKSHQLL RYRQQPLSGV ELRDNKNQAM TVPMETHCIA NNGDFLKAMA VSGHGIIFMP
TFIVWEELAK GTLLPIMNDY HFNSVHAYAL YPETRYLPQK VRKLIDFLSA YFGNEPYWDK
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