| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1196 |
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| Symbol | |
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| ID | 6986886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1303596 |
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| End bp | 1304492 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379571 |
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| Product | HTH-type transcriptional regulator, LysR family |
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| Protein accession | YP_002262670 |
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| Protein GI | 209694742 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCATGC TTGATCTACA TTGGCTTAAA ACATTTGTAA CGTTAGCCGA ATTAAAACAC
TTTGGTAAAA CAGCCACGGC TCTACACATG ACGCAACCTA ACGTTAGTTT ACATATCAAA
CAGTTAGAAA GAACAACTCG AGTGAAGTTG ATTGAAAGAA ACCCATTTCA TTTAACGGAA
GCAGGCGTTC GATTATTAGA AACCAGTCAA AATACATTAA TGGAGTTGCA AGTGTGCCAA
GCGGATCTCA ACGCCATTAA TGATTTAAGT CGTGGAACGT TGACGATTGC GGCAAGCGAT
ATTATTTCGC GCTTATTATT GATTGGGCCA TTCCAATTAT TTAAGCAAGA GTTCCCCGGA
ATAGATTTTT CTCTGCTTAA TACCACCTCT TCACAGGCGT CTGAATTAGT GAAAAGTGCC
GAAGCTGATC TTGGATTTGT TATCGCACAA AAAGAGAGTC AACCGCTTCA TTTTACTGAA
CTTCAGCAAA TAAAGTGGTG CGCATTGGGG AACCATCTTG AAAAGTGGCA ACAAGCGAAT
TTTGATCCTA CTATTGTTTT AGACAGTGAA CCTACGCTCA TATTATTAGG TCATGATACA
CGAACACGAG ATTTACTTGA TTTGGCGTTG CCATCTTTGA ATTTGCTTAA GTACCGGATC
ATGGAGGTGG GCAGTGTTGA TGCTCAGATT GATTGGGCTG AGGCAGGGTT TGGTGTTGCC
ATCGTTCCTG AATTCTCTAT TCACCCAAAG CGAAACCTTA AAACGACAGT AACGCTATTA
CCGAAATTCC CAACAACCAG TTTAGGTTAC ATTGTTAGAC AGAATCAGAT TTTATCTAAA
GCAATTAAAC AGTTACTTAA ATGGGTGGAT GAAGAAATTA TTCGCTCTCA AAAATAG
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| Protein sequence | MGMLDLHWLK TFVTLAELKH FGKTATALHM TQPNVSLHIK QLERTTRVKL IERNPFHLTE
AGVRLLETSQ NTLMELQVCQ ADLNAINDLS RGTLTIAASD IISRLLLIGP FQLFKQEFPG
IDFSLLNTTS SQASELVKSA EADLGFVIAQ KESQPLHFTE LQQIKWCALG NHLEKWQQAN
FDPTIVLDSE PTLILLGHDT RTRDLLDLAL PSLNLLKYRI MEVGSVDAQI DWAEAGFGVA
IVPEFSIHPK RNLKTTVTLL PKFPTTSLGY IVRQNQILSK AIKQLLKWVD EEIIRSQK
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