| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1149 |
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| Symbol | trpA |
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| ID | 6986869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1249890 |
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| End bp | 1250696 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379527 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_002262626 |
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| Protein GI | 209694698 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGTT ATCAAGCCCT ATTTGCTAAA TTAGCAGAAA AAAACCAAGG TGCATTTGTT
CCTTTTGTAA CCATTGGCGA TCCAAATCCA GAACTTTCTT ATGAAATCAT GGATACTTTA
GTAAAAGCAG GTGCCGATGC ACTTGAACTT GGTATCCCAT TCTCTGATCC TTTGGCTGAT
GGACCAACAA TTCAAGGTGC AAATATTCGT GCATTAAACA GTAAAACAAC GCCTATCGTA
TGTTTTGATT TAATCGCAAA AATCCGAGCT AAATATCCTG AAACCCCAAT TGGCCTATTA
GTTTACGCCA ACCTTGTCTT CGCAAATGGC ATTGATACTT TCTATACTAA ATGTCAGCAA
GCTGGTGTAG ATTCAGTGTT AATTGCAGAC GTACCAACCA ATGAATCAGA AGAGTTTAGA
ACAAGTGCAA TTAAACACAA TGTTCACCCT ATCTTCATTG CGCCTCCGTC AGCCTCAGAT
GAAACATTAG AAACCGTTGC TAAGCTTGGT GGGGGTTATA CTTACCTTCT TTCTCGTGCA
GGTGTTACTG GTGCTGAAAC TAAAGCGGGC ATGCCTGTTG CTCAATTATT AGCACGTTTA
AACCAATTTG ATGCACCTCC TGCGATTCTT GGTTTTGGTA TATCGGAACC TGCTCAAGTA
GAAGAAGCGA TTAAAGCCGG TGCAGCAGGC GCAATTTCAG GCTCTGCAAC TGTTAAAATC
ATTGAACAAC ATCAAGACAA TCCAGCGGCG TTACTTGATG CACTTACGGC ATTTACTTCT
GCCATGAAAG CAGCAACACA AAAATAA
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| Protein sequence | MDRYQALFAK LAEKNQGAFV PFVTIGDPNP ELSYEIMDTL VKAGADALEL GIPFSDPLAD
GPTIQGANIR ALNSKTTPIV CFDLIAKIRA KYPETPIGLL VYANLVFANG IDTFYTKCQQ
AGVDSVLIAD VPTNESEEFR TSAIKHNVHP IFIAPPSASD ETLETVAKLG GGYTYLLSRA
GVTGAETKAG MPVAQLLARL NQFDAPPAIL GFGISEPAQV EEAIKAGAAG AISGSATVKI
IEQHQDNPAA LLDALTAFTS AMKAATQK
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