Gene VSAL_I1029 details

Gene Information

• Locus tag: VSAL_I1029
• ID: 6986798
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1126756
• End bp: 1127472
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643379415
• Product: phage terminase, endonuclease subunit
• Protein accession: YP_002262518
• Protein GI: 209694590

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCTTAT CTCCAGGTAT GAGAGACAAC CTTGCAAAAA GAGCAAACAA AGAGCTTAAC 
GCTGTAACCG TAAGCTCAAT GGCTGACACC AACAGCTTAC ACATTAAGCT GATTGACTTC 
GAAGAAGACC GCAAGCATTT ACGCTCTTTT AATGCAATTG CCGATCGTGT TGAGCATAAG 
CGCAGCGTTT TAGTTCCGAA ATACAAACCG TATGTTCAAG CCTATTTAGA AAGTGGCGAC 
CAGTTTGAAA ATCCTATTTT TACCAACTTA GTGATCTGGT TATTCGACAT TAAAGAACTG 
GATACCGCAA TTGATTGGTG TATGAAGGCA ATCGAACGAG ATTTGCCAAC GCCAGAGAAT 
TTCCGCCGTG ATTGGCCGAC ATTCTGCGCC GATGAAGTAT TGGCATGGGC CGAGCGTGAA 
TCAGAACGCG GCCACTCTAT TCAACCGTAC TTCTCGCAAA TATTTGAGAA GGTTCACACT 
GAATGGCGTT TGCACGAAAA AGTGCAAGCC AAATGGTACA AGTTTGCAGG GTTATCGCTT 
ATTCGAAATG AAGATGGCAA CCCACAAGCA ACCGCCATTG GCAATGTAGA AACACTAGAA 
AAAGCATTAG CTTTATTGCA GCTCGCGCAT GAGAAACATC GTCATGCAGG CGTAGGTACG 
CAAGTTAAAA AAATAGAACA ACGTATTCGT GCCATTAAAG ATGGCAAGAA TCTGTAG 

 

Protein sequence

MRLSPGMRDN LAKRANKELN AVTVSSMADT NSLHIKLIDF EEDRKHLRSF NAIADRVEHK 
RSVLVPKYKP YVQAYLESGD QFENPIFTNL VIWLFDIKEL DTAIDWCMKA IERDLPTPEN 
FRRDWPTFCA DEVLAWAERE SERGHSIQPY FSQIFEKVHT EWRLHEKVQA KWYKFAGLSL 
IRNEDGNPQA TAIGNVETLE KALALLQLAH EKHRHAGVGT QVKKIEQRIR AIKDGKNL