| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1010 |
|---|
| Symbol | |
|---|
| ID | 6986780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 1112515 |
|---|
| End bp | 1113471 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643379396 |
|---|
| Product | probable phage regulatory protein CI |
|---|
| Protein accession | YP_002262499 |
|---|
| Protein GI | 209694571 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTAG ATAAGATTGA AAACTTTAAC TACCTGAAAG GATTCGACTT TACTGAAAAT
TTAAAATTCG TGACAGGGAC AAACTCATTT GTTGAACTAG CCCATTTACT AGGGATTGCA
AAAGGAAATA TTTCCACTTG GAATAGCAGA AACACCACTT CCTTTGAGTC AATTGTGCGC
TTGCATCTTA TTTATGGCAT TCCTGTAGAA GCAATGGCCC TAGGTAAAAA CCCTAAAAAG
TACAAAGCCG ACAAACCAAC CAAACCGTAC AAATACATGT CTGGCGAACC TTTCATTAAT
AAAATAAAAG AGATCACCGG TGCTAATACA CTGCTTGATT TATCTGAAAT CTTTGACATC
CCAAATACCA CATTTAGCGC GTGGCGCATG GCAAACCGAA ACTCACACGA GCTAACAGTT
CGCTTACATT TAGCCAAGGG CGTTCCTGTA AAAGAATTAG CATTTGAAAA TGGAGTAAAA
CCAGAAGGCT TTAGAGAATG GGTATCATCC ATAACTAGTG GCGTCCACCA AAATGAAAGC
GATAAGATGG AGCAACTAGG CGTTTCAGAC GTTGCATATA GTTACAACAG CAATGTTGAG
AAACTGCCAA ACCCACAACA CCAAACGGTT ATTGTGCAAA GCTTTTGTTT GAATAATGGA
AAGTTGCTTG ATACTGGCGA AATCCCGTAT GCATTGAGAA TGATGAACAG TTGGGATTTA
GCATCAAAGA ATGTGATTGA AGTAGAAACA AATGACGGGC GTTATTTGGT TGATATTTCA
CAGAACGACG CAGTAAGCGG ATCATACTTA ATAGATACGA ATGGAAGAAT GTCGATAAAT
ACCATTCAAC GCTTACCTAA TAAATTGTTG GTAGATTTCA ACGGCGCAAC CATTGAACTC
TCGGATGACG ATATAAAAGT AATAGGCCGC ATCGCGGTTA CAATAATTAA AAATTAA
|
|---|
| Protein sequence | MSLDKIENFN YLKGFDFTEN LKFVTGTNSF VELAHLLGIA KGNISTWNSR NTTSFESIVR
LHLIYGIPVE AMALGKNPKK YKADKPTKPY KYMSGEPFIN KIKEITGANT LLDLSEIFDI
PNTTFSAWRM ANRNSHELTV RLHLAKGVPV KELAFENGVK PEGFREWVSS ITSGVHQNES
DKMEQLGVSD VAYSYNSNVE KLPNPQHQTV IVQSFCLNNG KLLDTGEIPY ALRMMNSWDL
ASKNVIEVET NDGRYLVDIS QNDAVSGSYL IDTNGRMSIN TIQRLPNKLL VDFNGATIEL
SDDDIKVIGR IAVTIIKN
|
|---|
| |