Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1008 |
Symbol | int |
ID | 6986779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1110598 |
End bp | 1111641 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643379394 |
Product | phage integrase |
Protein accession | YP_002262497 |
Protein GI | 209694569 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTAA AAAAACTAGA CACCGACACT AAAAAACCAT GGCTTTGCGA TATTTACCCG CAAGGTAGAA ACGGCAAGCG AGTAAGAAAA CACTTTGCCA CTAAAGGCGA GGCACTTGCG TATGAAAAGT TTGTGCTAAA AGAAGCCGAC ACCACGCCAT GGGCAGGTAA AAAAATCGAA CGTCGAAGTT TGCTAGATAT GATAGACATG TGGCAAGAGA GACACGGCCA ATCACTTGCA CATCAAAAAT ACACCTACCG AAAACTAAAA GTAATTGCGC TTGGCATGGG CGACCCAATT TATACCAGGC TAACGCCCAA ACACTTTTTA GAATACAGAA CGGCTCGTTT GGCTGGGCAA ATTACAAACC TTAGCGGTAA AAAAGAACCG GTATCTTTTC GCACTTGTAA TATTGAGCAT GATTTATTGA ACGCGGTGAT TAACGAGTTG CGCCGCATGG AAGAATGGAA GTGCGAAAAC CCGCTTCAAT CGGTTCGACA ATTTAAACTG CATGAATCTG AAATGGAGTT TTTGACCATG GATGAAATGA AGTTGTTGAT CACCGATGCC GAAAATTACG AAACCCACGA TGATATGCAT AAAATAATTA AATTATGTTT GGCTACTGGC GGTCGCTTTT TAGAAGTTTC AAAATTAACT GGTTCACAAC TTTCTAAATA TAAAGTGACG TTTACTCAAA CTAAGGGAAA GAAGAACCGC ACCGTTCCAA TTAGCCAAGA CCTTTACGCT GAAATTTACA AAGAAGACTC AGGCCCACTT TTTAAAATAG GCTACTCTAC TGTTTACCGT TTTATTTCAA AACGAGTTCC ACGACTAACC CACCAAGCGG CTCATGTTAT GCGCCACACT TTTGCATCTT ATTACATGAT GAACGGCGGC AATATTATCG CTCTGCAAAG AATATTAGGT CATACCGATA TTAAACAAAC GATGAGATAC GCTCACTTAG CCCCTGACCA CTTAGAAGAT GTAGTCACCA AAAACCCGCT TTATATCATC AAAAATGACT ACAAAACCGA TTGA
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Protein sequence | MTVKKLDTDT KKPWLCDIYP QGRNGKRVRK HFATKGEALA YEKFVLKEAD TTPWAGKKIE RRSLLDMIDM WQERHGQSLA HQKYTYRKLK VIALGMGDPI YTRLTPKHFL EYRTARLAGQ ITNLSGKKEP VSFRTCNIEH DLLNAVINEL RRMEEWKCEN PLQSVRQFKL HESEMEFLTM DEMKLLITDA ENYETHDDMH KIIKLCLATG GRFLEVSKLT GSQLSKYKVT FTQTKGKKNR TVPISQDLYA EIYKEDSGPL FKIGYSTVYR FISKRVPRLT HQAAHVMRHT FASYYMMNGG NIIALQRILG HTDIKQTMRY AHLAPDHLED VVTKNPLYII KNDYKTD
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