Gene VSAL_I0886 details

Gene Information

• Locus tag: VSAL_I0886
• Symbol: metN
• ID: 6988613
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 988979
• End bp: 990013
• Gene Length: 1035 bp
• Protein Length: 344 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 643379287
• Product: DL-methionine transporter ATP-binding subunit
• Protein accession: YP_002262390
• Protein GI: 209694462
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG1135] ABC-type metal ion transport system, ATPase component
• TIGRFAM ID: [TIGR02314] D-methionine ABC transporter, ATP-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGAAA TAAACCGCGT CAATAAGGTC TTTTATCAAG GTGCAAAGGA AATTAATGCC 
CTTAAAGATA TTAACCTTCA TATTGCCCAA GGCACCATCT TCGGTGTTAT TGGTTCATCA 
GGTGCAGGGA AAAGCACACT GATACGCTGT GTAAACATGT TAGAAAAACC AACCAATGGC 
GAAGTCATTG TGGATGGTGT TGATTTAACT AAACTGTCGT CAAGTGAATT AAGCAAGGCT 
CGTCGTAATA TTGGGATGAT CTTTCAGCAC TTTAATCTTT TGTCTTCTCG CACTGTATTT 
GAAAATGTAG CTTTACCTTT AGAGCTTGCA GGAAAATCAA AACAAGAGAT TAATAAGAAA 
GTGAATGACT TATTAGATCT CGTCGGACTG TCAGACAAAC ACCACACTTA CCCTGCTAAT 
TTAAGCGGTG GTCAAAAACA ACGTGTGGCC ATTGCTCGTG CGCTTTCAAC CGATCCAAAA 
GTATTGTTAT GTGATGAAGC AACCAGTGCG CTTGATCCTG CGACAACGAA ATCAATTCTA 
GAACTGATTA AAGATCTAAA TCGTAAATTA AGCATCACTA TCTTAATTAT TACTCATGAA 
ATGGAAGTGG TAAAAAACAT CTGTCATGAA GTCGCGATCA TCGGTGATGG TGAATTGGTT 
GAGAAAGGCA TTGTGAGTGA TATTTTTGCT CACCCTAAAA CCGTTTTAGC TCAAGAATTC 
ATTCGAGCGA CATTAGATTT ATCAATTCCT GACGATTTTA AAACGCGTCT ACACGATACT 
TATGTCGAAG GCAGTTACCC TCTGATCCGT TTAGAGTTTA CTGGCGCAAC GGTGAATGCA 
CCGGTTATCA GTCAAATATC TCGTGAATTC AATATTGATA TCAGTATTTT AAGCTCTGAT 
ATTGATTACG CTGGCGGCGT TAAATTTGGC CTAATGCTTG CTGAGTTTTT CGGTAACCAA 
GAGTCAACAA AACAAGCGAT TGAATTCTTA CGTAATCATC ATGTAAAAGT AGAGGTGTTA 
GGTTATGTCG TTTGA 

 

Protein sequence

MIEINRVNKV FYQGAKEINA LKDINLHIAQ GTIFGVIGSS GAGKSTLIRC VNMLEKPTNG 
EVIVDGVDLT KLSSSELSKA RRNIGMIFQH FNLLSSRTVF ENVALPLELA GKSKQEINKK 
VNDLLDLVGL SDKHHTYPAN LSGGQKQRVA IARALSTDPK VLLCDEATSA LDPATTKSIL 
ELIKDLNRKL SITILIITHE MEVVKNICHE VAIIGDGELV EKGIVSDIFA HPKTVLAQEF 
IRATLDLSIP DDFKTRLHDT YVEGSYPLIR LEFTGATVNA PVISQISREF NIDISILSSD 
IDYAGGVKFG LMLAEFFGNQ ESTKQAIEFL RNHHVKVEVL GYVV