Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0871 |
Symbol | yejB |
ID | 6989430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 972806 |
End bp | 973834 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643379272 |
Product | inner membrane ABC transporter permease protein |
Protein accession | YP_002262375 |
Protein GI | 209694447 |
COG category | [R] General function prediction only |
COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCTT ATTTATTTAG ACGGCTTTTA TTGGTTGTCC CTACTTTCAT CGGTATTACC TTACTCATTT TTGCGCTAAC CCGATTTGTG CCTGGTGGAC CAGTAGAAAG AATGCTGCTG AGTTTACAAA TGCAAGGGAG TTCTGAAACT GGGGGAACCA GCAGCGTTAC TGATGGAAAT AATGCATTAT CTGAAGAGCA AATCGCAGAA CTTAACGCCT TTTATGGATT AGATAAGCCC GTGTTTGAAG CTTATTATGA TTGGTTAACA AAATTGGTCG TTCTTGATCT CGGTGAATCC ACCCGCTATT ACGAACCCGT ATGGGACATG ATCTCTGAAC GATTACCCGT GTCTTTATTT TATGGAGGAA TGACCTTTTT ACTCAGTTAC CTTATTTCAA TTCCTCTGGG TTACTTTAAA GCCTTAAAGC ACGGTTCCAT CCTCGATTCT ATGTCCTCTG TCGCTATTTT TGTTGGCTTT TCTTTGCCCG GTTATGTCAT TGGCGTTTTC TTAATTAGTT TATTTAGTTA TCAAATGGAG TGGTTCCCGA TGGGGGGATT TGTCAGTGAT GATTTTGATG ACTACGGTGC GATAGAACAA ATAAAAGACA TTATGTGGCA TGCGGTTTTG CCTCTGTTTT GTTATCTGAT TGGCGATTTT GCATTGCTTA CAATGACGAT GAAAAACAAT TTGATGGAAA ATTTGACGGC CGATTATGTA AGAACGGCCA TTGCAAAAGG GTTGCCATTT AAAACGGCCG TACGTAAACA CGCATTAAGA AACAGTCTAA TTCCGGTCGC GAGTCATTTT GGTAATTCGT TGATGTTTTT TATGACGGGA TCATTTTTGA TTGAGGTGAT ATTTAATATT GATGGTATTG GGTTGCTGGG TTATGAAGCG ATCATGGAGC GAGATTACCC GGTTGTGATG GGGTTGTTCG CTATTAACGC AATGATGCTG ATGATAGGGA ATATTTTATC TGATGTGTGT GTGGCGGTGG TTGATCCTCG CGTTAAGTTT GGAGCCTAA
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Protein sequence | MISYLFRRLL LVVPTFIGIT LLIFALTRFV PGGPVERMLL SLQMQGSSET GGTSSVTDGN NALSEEQIAE LNAFYGLDKP VFEAYYDWLT KLVVLDLGES TRYYEPVWDM ISERLPVSLF YGGMTFLLSY LISIPLGYFK ALKHGSILDS MSSVAIFVGF SLPGYVIGVF LISLFSYQME WFPMGGFVSD DFDDYGAIEQ IKDIMWHAVL PLFCYLIGDF ALLTMTMKNN LMENLTADYV RTAIAKGLPF KTAVRKHALR NSLIPVASHF GNSLMFFMTG SFLIEVIFNI DGIGLLGYEA IMERDYPVVM GLFAINAMML MIGNILSDVC VAVVDPRVKF GA
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