Gene VSAL_I0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0871 
SymbolyejB 
ID6989430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp972806 
End bp973834 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content40% 
IMG OID643379272 
Productinner membrane ABC transporter permease protein 
Protein accessionYP_002262375 
Protein GI209694447 
COG category[R] General function prediction only 
COG ID[COG4174] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATCTT ATTTATTTAG ACGGCTTTTA TTGGTTGTCC CTACTTTCAT CGGTATTACC 
TTACTCATTT TTGCGCTAAC CCGATTTGTG CCTGGTGGAC CAGTAGAAAG AATGCTGCTG
AGTTTACAAA TGCAAGGGAG TTCTGAAACT GGGGGAACCA GCAGCGTTAC TGATGGAAAT
AATGCATTAT CTGAAGAGCA AATCGCAGAA CTTAACGCCT TTTATGGATT AGATAAGCCC
GTGTTTGAAG CTTATTATGA TTGGTTAACA AAATTGGTCG TTCTTGATCT CGGTGAATCC
ACCCGCTATT ACGAACCCGT ATGGGACATG ATCTCTGAAC GATTACCCGT GTCTTTATTT
TATGGAGGAA TGACCTTTTT ACTCAGTTAC CTTATTTCAA TTCCTCTGGG TTACTTTAAA
GCCTTAAAGC ACGGTTCCAT CCTCGATTCT ATGTCCTCTG TCGCTATTTT TGTTGGCTTT
TCTTTGCCCG GTTATGTCAT TGGCGTTTTC TTAATTAGTT TATTTAGTTA TCAAATGGAG
TGGTTCCCGA TGGGGGGATT TGTCAGTGAT GATTTTGATG ACTACGGTGC GATAGAACAA
ATAAAAGACA TTATGTGGCA TGCGGTTTTG CCTCTGTTTT GTTATCTGAT TGGCGATTTT
GCATTGCTTA CAATGACGAT GAAAAACAAT TTGATGGAAA ATTTGACGGC CGATTATGTA
AGAACGGCCA TTGCAAAAGG GTTGCCATTT AAAACGGCCG TACGTAAACA CGCATTAAGA
AACAGTCTAA TTCCGGTCGC GAGTCATTTT GGTAATTCGT TGATGTTTTT TATGACGGGA
TCATTTTTGA TTGAGGTGAT ATTTAATATT GATGGTATTG GGTTGCTGGG TTATGAAGCG
ATCATGGAGC GAGATTACCC GGTTGTGATG GGGTTGTTCG CTATTAACGC AATGATGCTG
ATGATAGGGA ATATTTTATC TGATGTGTGT GTGGCGGTGG TTGATCCTCG CGTTAAGTTT
GGAGCCTAA
 
Protein sequence
MISYLFRRLL LVVPTFIGIT LLIFALTRFV PGGPVERMLL SLQMQGSSET GGTSSVTDGN 
NALSEEQIAE LNAFYGLDKP VFEAYYDWLT KLVVLDLGES TRYYEPVWDM ISERLPVSLF
YGGMTFLLSY LISIPLGYFK ALKHGSILDS MSSVAIFVGF SLPGYVIGVF LISLFSYQME
WFPMGGFVSD DFDDYGAIEQ IKDIMWHAVL PLFCYLIGDF ALLTMTMKNN LMENLTADYV
RTAIAKGLPF KTAVRKHALR NSLIPVASHF GNSLMFFMTG SFLIEVIFNI DGIGLLGYEA
IMERDYPVVM GLFAINAMML MIGNILSDVC VAVVDPRVKF GA