Gene VSAL_I0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0680 
SymbolrecC 
ID6986602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp757441 
End bp760824 
Gene Length3384 bp 
Protein Length1127 aa 
Translation table11 
GC content40% 
IMG OID643379079 
Productexonuclease V subunit gamma 
Protein accessionYP_002262197 
Protein GI209694269 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0257765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTACTG TTTATCATTC AAATCAACTT GATGTTCTTA AATCTCTTGT CGTTGAATTA 
ATTCGTCTAA ACCCTCTTGA TAACCCATTT GAGCAAGAGC AAATTCTCGT TCAAAGTCCG
GGTATGTCGC AATGGCTTAA AATCGAACTC GCCAAAGAGT TAGGCATTGC CGCCAATCTT
ACCTTTCCAC TTCCTGCTAC TTTTATTTGG GACTTGTTTA CTCAGGTTCT GGATGACGTG
CCAAAGCGCA GTGCTTTTAA TAAAGAAGCC ATGACGTGGA AGATAGTGAC GTTATTACCA
GAGTTATTAA AACAAGATGA ATTTGCGCCA CTGCAACGCT ATTTAGAAAA TGATGACAAA
CAATTGAAGT GCTACCAACT CGCTGCAAAA ATTGCCGATA TCTTTGACCA ATATTTAGTA
TTCCGCCCAG AATGGATCCA AAAATGGGAA GCGGGTGAAG AGGTTATAGA ATTAGAAGGC
GAACATCCTT GGCAGCCTAT TTTATGGCAA GCCTTGTATG ACCAAACCTT GGCGCTGGGT
CATTCACCTT ATCATCGTGC CAATATGTTC GAGCATTTTA TTGAAACCCT AGAAAATTAT
CTGCAAACGG GAACCTTGCC AAAAGGCATG CCTAAGCGTT TATTTGTGGT GGGTATCACT
TCATTGCCTC CTCGTTATTT AGATGCGCTA GCGGCTCTTG GGCAACATAT TGATGTGCAT
TTAATGTTTA CCAACCCATG TCAACATTAT TGGGGTGATT TACGTGATAA TAAATACCTA
GCAAAATTAG ATCGTCAAAA TCGAATAGCT AAACGTTTAT CATCAGATTT ATCTACACTA
GAAAATGATG ATAGTGATTT ATTTACAAAC AAATCAGAGA ATTCTTTATT AGCGTCATGG
GGTAAGTTAG GTAGGGATAA CTTTCAATTA CTGTTAGATT TAGAACCGAA TGAATATAAA
ATTTTTGTGC CAACAGGAAG GGAAGATCTT CTACATTCTA TCCAATCTGA TATTTTAAAT
TTAGAAGAAC GCAGTCGTGA TGATGTGCTT GATAACAGTG AGCACAAGCA ACCAATCAGC
CCTGATGACC GTTCGATTCT TTTGCATTCA TGTCATAGCC CAATGCGTGA AGTAGAAGTT
TTACACGATC AATTATTGGA TATGTTTGCC AATGATCCAG AATTAAAACC TCGCGATATT
ATTGTGATGG TAGCAGATAT CAATGTGTAC AGTGCGGCGA TCCAAGCCGT CTTTGGTAAC
GCAGCATTCG ATCGCTACAT TCCTTTTGCT ATTTCCGATC AAAGTGCCGA GCAAGAAAAC
CCAGTGCTAT TGGCTTTTAT GAATTTGATG GCGTTGCCTG AAAATCGTTG TGGTTTGTCA
GAGCTATTAA GTTTGTTGGA AGTTCCTGCG GTCATGTCAC GTTTTAAATT TAATGCCGAG
CAGTTTGAAA TAGTAAAACG ATGGGCAGAA GAAACCGGCA TTCGCTGGGG ATTGGATAAC
AGCACCTCTG CGCATTTTGA TCTTCCTGAA CATAATCAAA ATTCATGGTT ATTTGGTATT
CAGAGAATGT TGCTTGGTTA TGCGATGGAG CAAGACGCGG GCTTATTTGA AGGCATGGCG
AGCTACGAAC AAGTGCAAGG CATGAATGCC GAAATAGCAG GTAACTTAGC GCACTTTATT
GATCAGCTTT TGACTTATCA GATTACCCTA GGCCAAGCGC AAAAAATTAA TGCATGGCGC
ACCATTATTA ACCAACTAAT GGACGATTTT TTACTTGTTG AATTAGAAGG TGAACTGGTC
GTTAAAAGCA TTCGAGATCA ATTGCAAAAA CTGGAAGAAA ATCTTGAAGA CGCCGGATTT
GATGCACCAA TCTCTGCACC AATTATTAAT AATTACCTAA AAAACAATTT ATCAGGAGGA
AAAGCGAGTC AGCGTTTCTT AGCGGGGAAA GTAAATTTCT GTACCTTAAT GCCAATGCGC
TCAATTCCAT TTGATGTGAT CTGTTTACTT GGTATGACGG ATGGGTCTTA TCCGCGAACG
ATGCCGGTTG AAGGTTTCGA TTTAATGCAG AAACGAATGA AGCCGGGTGA CCGTTCTCGT
CGAGATGATG ATAGATATTT ATTTTTAGAA GCACTGCAAT CGGCGAATAA AGCGTTTTAT
CTCAGCTATA TAGGTCGTTC TATTCGAGAT AATACAGAAA AAGCCCCTTC TGTTTTGGTG
AGTGAACTGC TTGAATATTG TCAGCAAAGT TATTGTCTAG ATGGCGATAG TGAGCTGAAC
CCTGAAGAGT CTGCTAAACA CCTAGTTAAA AAATTAACAA TAGAACATCC ATTAGTCCCA
TATAGCCAAC AGAGTTTTGT GGGTGATAAC ACCAGTTATG CCAGTGAATG GTTACCAACC
GCAAAACTAG AAGGCCAAGC CGCGCCAGAA TTCCAAACTG AACCTTTAGT GTTTGCACCA
GAATCAAAAG AGCTTGAATT AACCGAACTA CAACGCTTTT GGCGCTTGCC TGTCGCCTAT
TTCTTTAACC GTGGTTTAAA AGTATTTTTT GAAACGGTAG AGAGCCGAGT TGAAGATGAT
GAACCGTTTT CTATTGATGG TCGTACTGGT TATGGAATGA AATCAGAATT GCTAGAAGAG
TTATTGGCCT ATGATGATCC TAACCAAGTA TTTCAACTAA GTCGTGAGTT TTATCAGCAA
CAAAAAGCGC AAGGAAAATT ACCGATTGGT AGCTTTGGTG AGATCGCGGC AGACAAAGAA
GTGAACACGG TAAAAGAGTT AGTGGATCAT ATTCAGCCAT TAACGACATC ACCATTAGAG
GATCAAGAAG TGCGTTTACG CTTTACTTTT CCTCATGGTG AGATGGAATT ACAAGGCTGG
CTAAAGCAGC GTTATAAAGA AGGAATGCTG CGTTATCGTG GTGGTAAAAT TCGTTCTCAT
GAAGTCTTAG CAACGTGGAT TGATCATCTG TGTTTGTGTG CCATGAAGCA ACAGCAATTT
ACTCACCTCT TTGGGACCGA TGCGATATAT CATTTTGAGC CAATTGAAAC AGAAAAAGCG
TATCAACATT TAGAAGTGAT ATTAAGCCTT TATATTTCTG GTAACTGTGC GCCATTGCCT
TATTTACCAA AAGCCGCGTT GGCCGGGCTA GAAGCACACA TTGATAAAAA AGGTGTGTGG
AATGACGATG ATGAAACCCA TGAAAAAGCA CTGAAAAAAA TGGCTGATGA ATACAGTGGA
ACTCGTTACG CGGGTGAAAA CAGCAATGAT TATGTCATGC GTATGTGGCC CGAGTGGAAT
GACGAATTAG GTCAGACTAT TTTTGATAAT GCGAAAAATG TATTACATGA TGCCTTGTTA
CACAGTGAGA AAGAAAAACT GTAA
 
Protein sequence
MFTVYHSNQL DVLKSLVVEL IRLNPLDNPF EQEQILVQSP GMSQWLKIEL AKELGIAANL 
TFPLPATFIW DLFTQVLDDV PKRSAFNKEA MTWKIVTLLP ELLKQDEFAP LQRYLENDDK
QLKCYQLAAK IADIFDQYLV FRPEWIQKWE AGEEVIELEG EHPWQPILWQ ALYDQTLALG
HSPYHRANMF EHFIETLENY LQTGTLPKGM PKRLFVVGIT SLPPRYLDAL AALGQHIDVH
LMFTNPCQHY WGDLRDNKYL AKLDRQNRIA KRLSSDLSTL ENDDSDLFTN KSENSLLASW
GKLGRDNFQL LLDLEPNEYK IFVPTGREDL LHSIQSDILN LEERSRDDVL DNSEHKQPIS
PDDRSILLHS CHSPMREVEV LHDQLLDMFA NDPELKPRDI IVMVADINVY SAAIQAVFGN
AAFDRYIPFA ISDQSAEQEN PVLLAFMNLM ALPENRCGLS ELLSLLEVPA VMSRFKFNAE
QFEIVKRWAE ETGIRWGLDN STSAHFDLPE HNQNSWLFGI QRMLLGYAME QDAGLFEGMA
SYEQVQGMNA EIAGNLAHFI DQLLTYQITL GQAQKINAWR TIINQLMDDF LLVELEGELV
VKSIRDQLQK LEENLEDAGF DAPISAPIIN NYLKNNLSGG KASQRFLAGK VNFCTLMPMR
SIPFDVICLL GMTDGSYPRT MPVEGFDLMQ KRMKPGDRSR RDDDRYLFLE ALQSANKAFY
LSYIGRSIRD NTEKAPSVLV SELLEYCQQS YCLDGDSELN PEESAKHLVK KLTIEHPLVP
YSQQSFVGDN TSYASEWLPT AKLEGQAAPE FQTEPLVFAP ESKELELTEL QRFWRLPVAY
FFNRGLKVFF ETVESRVEDD EPFSIDGRTG YGMKSELLEE LLAYDDPNQV FQLSREFYQQ
QKAQGKLPIG SFGEIAADKE VNTVKELVDH IQPLTTSPLE DQEVRLRFTF PHGEMELQGW
LKQRYKEGML RYRGGKIRSH EVLATWIDHL CLCAMKQQQF THLFGTDAIY HFEPIETEKA
YQHLEVILSL YISGNCAPLP YLPKAALAGL EAHIDKKGVW NDDDETHEKA LKKMADEYSG
TRYAGENSND YVMRMWPEWN DELGQTIFDN AKNVLHDALL HSEKEKL