| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0426 |
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| Symbol | |
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| ID | 6986484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 462963 |
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| End bp | 464222 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643378802 |
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| Product | predicted permease |
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| Protein accession | YP_002261955 |
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| Protein GI | 209694027 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGGCA TTTTGCAATT GGCTTGGAAA AGCCTTAAAA ACCGTAAGAC CACGGTATTA
CTTACTGTTG CTACTATCGC TATCTCTGTC ATGTTATTAG TCGGTGTTGA ACGTATTCGT
ACCCAAGCTA AAACAAGCTT TGCAAATACC ATATCAAACA CAGATTTAAT TGTTGGCGCA
CGTTCAGGTC AAGTGAACCT CTTGCTTTAC TCTGTTTTTC GCATTGGTAA CGCGACAAAT
AATATTGATT GGAAAAGCTA TCAAGAAATA ATCAGCCAGC GGGCAGTGAA ATGGTCAATA
CCAATCTCTC TTGGAGATTC CCATAAAGGA TTTCGAGTCA TGGGAACGAA TCAAGATTAT
TTTCGCTTTT ATCAATATGG AAAAAAACAA CCACTGGCTT TTAAAGAAGG AAAGCCATTC
GACGACCTAT TTGATGTCGT ATTAGGCGCC GATGTGGCAC AAAAATTAAA TTATCATTTA
GGTGATAAGC TCGTTATTGC TCATGGTATT AGTGATAAAT CATTTACCCG TCACGATAAG
CTGCCCTTTA CGGTTGTTGG TATTTTAAAG CCAACAGGGA CGCCAGTAGA CAAAACGTTA
CATGTGTCTT TAGGTGCAAT TTCTGCCATC CATGTTGGAT GGGAAAGCGG TGCGCACTTA
GGAAATACAC CCGATGCTAA AATATTAGAA AAACAAAAAT TTGAACCCAC CGAAATTACG
GCATTTATGC TTGGTCTAAA ATCAAAAATT CAAACATTTG CATTGCAGCG CTACATTAAC
GACTATACCA AAGAACCACT CAGTGCCATT TTACCAGGTA TTGCTTTACA CGAATTATGG
GGAATGATGT CAGTTGCTGA GCAAGCGCTA TTAGCTGTTT CTATTTTTGT GGTTGCCGCA
GGATTAATGG GAATGCTCAC CAGCCTACTC ACTAGCCTTC AAGAGCGACG CCGAGAAATG
GCCATTTTAA GAGCGATGGG AGCGCAGCCT AAACATATTT TTATATTATT AGTAAGCGAA
GCCGTTGTCA TTACAAGCTT TGGGATCATC GTAGGCCTAA TAGGTCTTTA CCTCTCATTA
AGCATATTGC AGCCAATCAT TCAGCAGTAT TACGGCATTG CGATAGAGCT CACCTTACCC
ACACTTTATG AATTAAAATT ACTCGCACTC GTCTTGTGCT CTGGTTTTAT TATTGGTGTT
ATTCCAGCAA TACAAGCGTA TCGCCACTCA TTAAGTGATG GTATGACAAT AAGACTTTAA
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| Protein sequence | MVGILQLAWK SLKNRKTTVL LTVATIAISV MLLVGVERIR TQAKTSFANT ISNTDLIVGA
RSGQVNLLLY SVFRIGNATN NIDWKSYQEI ISQRAVKWSI PISLGDSHKG FRVMGTNQDY
FRFYQYGKKQ PLAFKEGKPF DDLFDVVLGA DVAQKLNYHL GDKLVIAHGI SDKSFTRHDK
LPFTVVGILK PTGTPVDKTL HVSLGAISAI HVGWESGAHL GNTPDAKILE KQKFEPTEIT
AFMLGLKSKI QTFALQRYIN DYTKEPLSAI LPGIALHELW GMMSVAEQAL LAVSIFVVAA
GLMGMLTSLL TSLQERRREM AILRAMGAQP KHIFILLVSE AVVITSFGII VGLIGLYLSL
SILQPIIQQY YGIAIELTLP TLYELKLLAL VLCSGFIIGV IPAIQAYRHS LSDGMTIRL
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