Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0247 |
Symbol | wavT |
ID | 6989122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 292617 |
End bp | 293456 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643378630 |
Product | putative glycosyl transferase |
Protein accession | YP_002261785 |
Protein GI | 209693857 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAAC CAAAAGCCTC TTTAATTATT GCATTTTATA ACAATACAGT ATGCTTAGAG TTAATATTTA AAGCCTTATC TACTCAAACG GAATCCAATT TTGAAGTGAT TATCGCGGAT GATGGTTCAA AGCAAGAAGC TATTGATTTC ATTAATACCC GTAAAGAATC CTTACCTTTT ACCGTTAAGC ATGTGTGGCA TGAAGATAAA GGTTTTAGAA AGAATCGTAT CCTTAATCAT GCAGTGCTCA AATCCAGTAG TGATTACTTG ATCATTATTG ATGGTGATTG TATCCCAGAA AAGCACTTTA TTGAGGATCA CTTTAATAAT GCAGAAAAAG GGCGTAGCTT AAGTGGTCGT CGAGTTGAAC TCCCAGAGCT GTATACTCAA CGAGTTATGA ATAGCGTATC TCCAGGAGCA TTTTTTAGTG AAAATAAGCT AGAAATTTTA ATACGGTACA TGTTATCTAA TGGAGATAAA CAAACAAAAG GTCGCCATAT TGAAAAAGGC CTTAGATTTG CTAAGCTGTG GCAACAATCT CTGTTTAAAG GAAAGAAAGC CAAAGCGATT TTAGGTTGTA ACTTCTCATT ATTTAAAGAA GATTTATTAA AAATAAACGG CTTTGATATG AGATATGAAG CGCCAGCAGT AGGTGAAGAC AGTGATGTTG ACTATCGACT AAACTTAGTC GGTGTTACCA ATAAATCTCT CAATGGACTT GCCGTACAAA TCCATTTGTA CCATCCATGG TTAGATAGAG TTTCGGGTAA TTGGGATATT CTCAGAGATA CCATGAAGCA TGAGAGGTAT TGGGCTGATA GTGGTATTAA TGATTGTTAA
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Protein sequence | MLKPKASLII AFYNNTVCLE LIFKALSTQT ESNFEVIIAD DGSKQEAIDF INTRKESLPF TVKHVWHEDK GFRKNRILNH AVLKSSSDYL IIIDGDCIPE KHFIEDHFNN AEKGRSLSGR RVELPELYTQ RVMNSVSPGA FFSENKLEIL IRYMLSNGDK QTKGRHIEKG LRFAKLWQQS LFKGKKAKAI LGCNFSLFKE DLLKINGFDM RYEAPAVGED SDVDYRLNLV GVTNKSLNGL AVQIHLYHPW LDRVSGNWDI LRDTMKHERY WADSGINDC
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