Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0160 |
Symbol | waaL |
ID | 6988669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 199602 |
End bp | 200828 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643378548 |
Product | O-antigen ligase WaaL |
Protein accession | YP_002261706 |
Protein GI | 209693778 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TAAGCTTACC TTTAATTGCT ACAATACTTT GCTTTCTATT CTTCAGCACC CCTATTATTT ATCCTGACTC TTACGTGGTT GCTCCGCTTT TATTGGCACT ATTTGGTTTG TTTTTACTGC CAAAAACCTA TCACGCCTTT AAAAACAGAG ACGTTAAATA CATTAGCTTA TCCATGGTTG GGTATTTTAT TCTTACCATC ATCTCTTTTC TGTATTCAGG AGGAGAAACC AGCCAACTTG ATATGCCAAG CCGAACGGTG TTGGCCTCTT TCATTTTATG TTTTTTAGTC ACTTATAAAC CCAATCCGGC ACCACTATTT CTGGCTGCAC CGATTGGAGC GGCGATTGCA GGCTTCATCA GTTTTTACCA TAGCTTTTAT ATTGGCGGGT GTGCTTTTGT CGGTACGTTT GGTTACATGC CAATTCAAAT TGGAGGTATT ATCGCCTCAT TAGCCACATT CTCTGTTATC TCGTTTTTTT ATTACCGTAA AACAGAACAG AAGAACTTTG CTGTATTCAG CTTCGTTGCC GCTAATTTAG GCTACATCGC CACGTTATTA TCTGGTGCTC GCGGTGCTTG GCTATTAACT CCCTTTGTTT TACTTATTGT TCTGTATTTA AATAAAGAGT TAATAAATAA AAAAATAGTC GGTTACGCTC TACTTGCTGC AATTATCGAT TTATCTATTG CCTCAGCCCA AATCACTTCT CGACTTGATG CAATACAGTC TGATTTAACT CAATACTCAG CTGAACAATC CGCTAGTTCT TCTGGTGCAC GCTTAGAGAT GTGGAAATCT GCATTATATA GCGCACAAGA ATCCCCATTA TTTGGTCAAG GATTTTCTGG TATTGAAGCA GCAAAACAGC GCCAACTCGA CGCTGGACTC ATAGATCCAA TTGCCTTGAA ATACTCTCGA GCTCATAACC AATATTTAGA AGATTTACAA ACCAAAGGGA TTTTTGGTCT CTCTGTATTG CTGATCATGT TTGCGGTGCC TTTTGCTTTT TTCAAAAGAA ACCTGAAACA ATATATCAAT GATTCAGACA AAGACACACA CTACTTTTTG GCCCTAATGG GAGCCTCGCA CGTCGCACTG GTTGCAGGCT ATGCCCTTAC CCAACATTAC TTATCACATC ACTCAGGCAT TTTATTCTTT GCCGTTGGCA TCGCCATACT GAGCGCCTTA GTGATTAACC AAAGAAAACC ATCATGA
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Protein sequence | MKKISLPLIA TILCFLFFST PIIYPDSYVV APLLLALFGL FLLPKTYHAF KNRDVKYISL SMVGYFILTI ISFLYSGGET SQLDMPSRTV LASFILCFLV TYKPNPAPLF LAAPIGAAIA GFISFYHSFY IGGCAFVGTF GYMPIQIGGI IASLATFSVI SFFYYRKTEQ KNFAVFSFVA ANLGYIATLL SGARGAWLLT PFVLLIVLYL NKELINKKIV GYALLAAIID LSIASAQITS RLDAIQSDLT QYSAEQSASS SGARLEMWKS ALYSAQESPL FGQGFSGIEA AKQRQLDAGL IDPIALKYSR AHNQYLEDLQ TKGIFGLSVL LIMFAVPFAF FKRNLKQYIN DSDKDTHYFL ALMGASHVAL VAGYALTQHY LSHHSGILFF AVGIAILSAL VINQRKPS
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