| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0134 |
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| Symbol | |
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| ID | 6986341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 169900 |
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| End bp | 171447 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643378526 |
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| Product | L-2,4-diaminobutyrate decarboxylase |
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| Protein accession | YP_002261684 |
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| Protein GI | 209693756 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACTA AATATTTTGA AAAAAACGCC AATAACGATA CTCTCTTTAA CCAAAGTAGT
CTCTTAAGTA ATGTGGATTT TTTTGATTCA AGTTCTTTAG ATCATTATAA AGAAATCACA
GAGTTAGGGC TCAACACGCT TATTAAAACA GTAAAAGAAA CATCACACCC TAATTCTGGG
ATCTCGCCAG AAGAATTAAA GAACGCCTTC AAAAATATAG ATTTAGATTC TCCTTTAATT
GATATTAATG ATGTTGTAGA TGAATTGGAT GAGCTTTACC TTAAGCATGC TGTCTATTTC
CATCATAAAG ATTACTTAGC GCATTTAAAT TGCCCTGTAT TATTAACCTC ATTATTAGCT
GAGCAAATTA GCTGTGCGAT TAATACCGCG GTTGAAACCT GGGATCAAAG TGCCGGTGGT
ACATTCATTG AACAGAAAGT AATAGATTGG CTTGCATACC GTATAGGTTA TCTAAAGTCT
GCCGATGGTG TATTTACCAC TGGAGGTACA CAATCTAATC TAATGGCACT GTTACTGGCC
AGAGAGCAAT GCAGCACTAA ACTTGATGAC ACCAAGAAAG CATCATTACC TACCAATACC
AGTAAATTCC GTATTCTTTG TTCTGAATAC AGCCATTATA GTATTCAAAA AGCGGCATTC
GTTTTAGGCT TAGGTCAAGA GGCGGTAATT AGTGTTCCTG CTAACGCTCA GCGACAAATG
GATCCGACTG CGCTTTCATC AACATTGGCA TCACTGGTAG AGCAAGGATT AATTCCAATG
GCGGTGGTTG CTACCGCTGG CACCACCGAT TTTGGTTCTA TCGATCCTAT CGAAGAGATA
GCTTCTCTTT GTCAGCAATA TCAATGTTGG TTGCATGTAG ACGCGGCATA CGGTGGCGTA
TTACTGATTT CGAATAAATT TCCTCACTTA TTGAAAAGTA TTGAACAAGC CGATTCTGTT
AGCATCGATT TTCATAAATC ATTTTTCCAA CCTTTATGCT GCTCAGCCCT TATGGTGAGT
AATGGTCAAT CTCTTTCTCA TCTTACCTAT CATGCCGATT ACCTAAACCC AAAACACCAA
GCCGATAATG GTATTCCTGA CCTTGCCAAC AAAAGTCTTC AAACATCACG ACGATTCGAC
GCTTTAAAGA TTTGGCTTAC TTTACGAGCT TGCGGGCCAG AAGCCATCGG TAAGTTATTT
GATGACTTAA TCCTTAATAC TCAAGAAGTC TATCAACGCA GTCAGCACCT AACCGATATT
AAGTTTGTTC AAGAGCCACA ACTGACCACA TTGGTATTTA GATTCGTCGA CCAACGCCTT
ACCCCGACAG AACAGGACAC CTGCAACAGG GCAATTAGAG AGGCACTTTC TAAATCAAGA
AGAGCGTTAA TCGCAGCAAC CGTGGTTAAA GGTCGTCAAT ATCTCAAAAT AACGATGTTA
AACCCTCAAA CCCCCGTGAA CAGCATCGTT GCCGTATTTG AAGCCATTAA TACGTGTGGT
CATTCAATCA CCGAGCAACT GCTTACCAAT GTAAAACAAA GCGCCTAA
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| Protein sequence | MDTKYFEKNA NNDTLFNQSS LLSNVDFFDS SSLDHYKEIT ELGLNTLIKT VKETSHPNSG
ISPEELKNAF KNIDLDSPLI DINDVVDELD ELYLKHAVYF HHKDYLAHLN CPVLLTSLLA
EQISCAINTA VETWDQSAGG TFIEQKVIDW LAYRIGYLKS ADGVFTTGGT QSNLMALLLA
REQCSTKLDD TKKASLPTNT SKFRILCSEY SHYSIQKAAF VLGLGQEAVI SVPANAQRQM
DPTALSSTLA SLVEQGLIPM AVVATAGTTD FGSIDPIEEI ASLCQQYQCW LHVDAAYGGV
LLISNKFPHL LKSIEQADSV SIDFHKSFFQ PLCCSALMVS NGQSLSHLTY HADYLNPKHQ
ADNGIPDLAN KSLQTSRRFD ALKIWLTLRA CGPEAIGKLF DDLILNTQEV YQRSQHLTDI
KFVQEPQLTT LVFRFVDQRL TPTEQDTCNR AIREALSKSR RALIAATVVK GRQYLKITML
NPQTPVNSIV AVFEAINTCG HSITEQLLTN VKQSA
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