| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0095 |
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| Symbol | |
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| ID | 6986308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 128498 |
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| End bp | 130051 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643378488 |
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| Product | transport protein, extracellular solute-binding protein |
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| Protein accession | YP_002261646 |
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| Protein GI | 209693718 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0865281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA TTAAGACTAA ATTAGCGATC GCGATTATGG CTGCAGGCTT AAGCTTTAGT
GCTGCTGCGG CAGATATTAC GGTAGCTTAT GATGCTGATC CAGTATCTCT TGACCCACAT
GAGCAACTAT CAGGCGGTAC ACTGCAACTG TCTCACATGG TGTTTGATCC CCTAGTTCGT
TATACGCAAG AGTTCGACTT TGAACCTCGT TTGGCTGAAA AATGGGAACG TGTCGATGAC
AAAACGTTCC GTTTTACGTT ACGTAAAGGT GTGAAGTTCC ATTCTGGCAA TACAATGACT
GCAGATGATG TGGTATGGAC ATTTAATCGT CTTAAAGACT CTGCGGATTT TAAAGCGATT
TTCGCACCGT ATGAAAAATT AGTAAAAATT GATGATTACA CCGTAGAACT TATTTCTAAA
GGCGCTTATC CGTTGGTTCT TCAAACCGCG ACTTACCTTT TCCCTATGGA TAGCAAGTTC
TACTCAGGAA AAACTGAAGA TGGTAAAGAT AAAGATGAAA TCGTAAAACA CGGTAATTCA
TTTACTTCAA CGCACATCTC TGGTACTGGC CCATTTGTTG TTAAGTCTCG TGAACAAGGC
GTGAAAGTCG TGTTTGATCG TTTTGACGGT TACTGGGATA AAAATTCTCC AGGTAACGTC
GATGAGCTGA CTTTGGTTCC AATTAAAGAA AATGCAACAC GTGTTGCTGC GCTTCTTTCT
GGTGACGTAG ACGTTATCGC CCCTGTGGCA CCGAATGATC ACAAGCGAGT GAAAAATACG
AAGGGTATCG ATTTAGTTAC ATTACCTGGT ACTCGTCTAA TTTCATTCCA AATGAATCAA
ACAAGCAACG AAGCATTAAA AGATGTACGT GTTCGTCAAG CTATCGTTCA TGCAATCAAT
AACGAAGGTA TCGTTAAGAA AATCATGAAA GGCTTTGCGA CAGCGGCCGG TCAGCAATCT
CCTCCAGGTT ATTCTGGCTA TGATGCTGAT TTGGTTCCAC GTTATGATCT TAAAAAAGCA
AAAGAGTTGA TGAAAGAAGC GGGTTACGAG AATGGCTTCA AACTTAGCAT GATGGCGCCA
AATAACCGTT ATGTGAATGA TGCAAAAATC GCTCAAGCTG CGGCAGCAAT GCTGTCTAAG
ATCGGAATCA AAGTGGATCT TAAAACGTTG CCAAAAGCAC AATACTGGCC TGAATTTGAT
GTTTGTTCTG CGGACATGAT GATGATCGGT TGGCACTCAG ATACAGAAGA TTCAGCGAAC
CTTACTGAAT TCTTAACGAT GACTCGTAAC GAAGAAACGG GTAAAGGTCA GTATAACTGT
GGCCATTATT CAAACCCTGA AGTTGATCGT CTAATTGAAG CGGCAAACGT AGAAACGGAT
CCAGCGAAAC GCAGTGAGAT GCTGAAAACA GTGGAAGACA CGTTGTATAA CGACGCGGCG
TTTGTTCCTC TGCATTGGCA AAATCTTGCG TGGGGTGCAA AATCAAATAT TGATATTCAA
CCAATTGTTA ACTCGATGGA ATACCCATAC TTTGGTGACT TAGTTGTTAA GTAA
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| Protein sequence | MKTIKTKLAI AIMAAGLSFS AAAADITVAY DADPVSLDPH EQLSGGTLQL SHMVFDPLVR
YTQEFDFEPR LAEKWERVDD KTFRFTLRKG VKFHSGNTMT ADDVVWTFNR LKDSADFKAI
FAPYEKLVKI DDYTVELISK GAYPLVLQTA TYLFPMDSKF YSGKTEDGKD KDEIVKHGNS
FTSTHISGTG PFVVKSREQG VKVVFDRFDG YWDKNSPGNV DELTLVPIKE NATRVAALLS
GDVDVIAPVA PNDHKRVKNT KGIDLVTLPG TRLISFQMNQ TSNEALKDVR VRQAIVHAIN
NEGIVKKIMK GFATAAGQQS PPGYSGYDAD LVPRYDLKKA KELMKEAGYE NGFKLSMMAP
NNRYVNDAKI AQAAAAMLSK IGIKVDLKTL PKAQYWPEFD VCSADMMMIG WHSDTEDSAN
LTEFLTMTRN EETGKGQYNC GHYSNPEVDR LIEAANVETD PAKRSEMLKT VEDTLYNDAA
FVPLHWQNLA WGAKSNIDIQ PIVNSMEYPY FGDLVVK
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