| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2898 |
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| Symbol | hemC |
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| ID | 6878902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2879228 |
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| End bp | 2880148 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642790751 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_002221289 |
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| Protein GI | 198284968 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.101786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0803505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCACT CCCTTCGCAT TGGTACCCGT GCCAGCCCGC TGGCCGTCTG GCAGGCAGAG
CACGTCCGCG CCGCCCTGTT GCGGCTTCAC CCAGGGATGG CGGTCGAGAT CATCACCATG
ACCACCAGCG GCGACGTTCT TCTGGATGCA CCTCTGCATG CGCTGGGGGG TAAGGGCCTC
TTCGTCAAGG AAATCGAAGA TGCCCTGCAG CAGCGGCGGG TGGATGTCGC CGTGCACTCC
ATGAAGGATG TGCCGGCGCT ACAGCCGGAT GGTCTGGAAA TCGTCGCCAT CATGGCCCGG
GAGGATGTCC GGGATGCTTT CGTCAGCAAT ACCTTTCTGC ATCCCGATGC CCTGCCGGAG
GGCGCACGGG TGGGAAGCTC CAGCCTGCGG CGGCGGGCGC AATTACTGGA GCGCTACCCT
CATTTGCGGG TCGAGGACCT GCGCGGCAAT GTCGCTACGC GCCTGCGTAG GCTGGACGAG
GGGCATTATG ACGCGATCAT TCTCGCCGCT GCGGGCCTAA AACGCCTTGG TTTGCCCGAT
CGCATCACCC ATCTGCTGGA TATCGACCGC TCTCTGCCGG CGGTGGGGCA AGGGGCCATA
GGCATCGAGG CGCGCAGCGA CGATCGGCGG ACCCGGGAAC TGCTGGCCCC CCTGGCCGAC
GCCGATACCC AGAACTGCGT GCTGGCGGAG CGCAGCATGA ATCAGGTGCT GGGCGGGGAC
TGCCGGCTCC CGGTGGCGGC GCTCGCCCGA TGGCAGGGGC CGCAGATGCT CCTGCGCGGG
CTGGTCGCCA CCCCGGATGG GCGCCGGGTA CTGCATGCCG AGGCGAAGGG CAGCGACCCC
GTCGCCCTGG GCATGGCCGT CGCTGCGGCC TTGGTCGCGC AAGGGGCGGC AGAGATTATC
GAGGACGTCC GGAACGCATG A
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| Protein sequence | MPHSLRIGTR ASPLAVWQAE HVRAALLRLH PGMAVEIITM TTSGDVLLDA PLHALGGKGL
FVKEIEDALQ QRRVDVAVHS MKDVPALQPD GLEIVAIMAR EDVRDAFVSN TFLHPDALPE
GARVGSSSLR RRAQLLERYP HLRVEDLRGN VATRLRRLDE GHYDAIILAA AGLKRLGLPD
RITHLLDIDR SLPAVGQGAI GIEARSDDRR TRELLAPLAD ADTQNCVLAE RSMNQVLGGD
CRLPVAALAR WQGPQMLLRG LVATPDGRRV LHAEAKGSDP VALGMAVAAA LVAQGAAEII
EDVRNA
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