Gene Lferr_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2878 
Symbol 
ID6878882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2861220 
End bp2861771 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content63% 
IMG OID642790731 
ProductPhospholipid-binding protein-like protein 
Protein accessionYP_002221269 
Protein GI198284948 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.965435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA TGAAGGTATT TAGCACCGGC ATCGATCCCG ACGACTGGAT CGCCAGACGT 
TTCACCCAAA CCGGCGACGG GCGCACCCCG CCCATCTTCT GGCAGCATCT GCCAACCGAC
ACCAAGAGCC TGATCCTGCT CATGGAACAT CGTGAGGCGG AACCGGGGCG CAAGGTCCAG
TGGCTGATCT ACGACCTGCC GCCCGCTGCG GAAGGCATCC ACGAAGATGG CCCGTTGCCC
GATGGCGCCA GGCTGGGGCG CAATGACTTC GGGACCATGG CCTACCGCCC GCCGGAGGCA
GGTGCCGACC ATCAGCTTCA ACACTACGAC TTTATCCTGA TAGCGACCGA CCTGCCCACC
CTCGGGCTCG CCGAAGGCGC CAACTGGGAA TCGGTGAAGG GAAGGCTGCG CAAGGGAGGT
CAGGACAGCG ACCAACTCGG ACCACCCCCC GCCGCGGACC CCCGCGCCCG TGAATTCCAT
CCGCTCGGTC ACATCCTTGA CCATGCGGAG TTTTCTGGGC ATTTCGCGCT GGATACGGAC
AAGCACGTTT GA
 
Protein sequence
MAEMKVFSTG IDPDDWIARR FTQTGDGRTP PIFWQHLPTD TKSLILLMEH REAEPGRKVQ 
WLIYDLPPAA EGIHEDGPLP DGARLGRNDF GTMAYRPPEA GADHQLQHYD FILIATDLPT
LGLAEGANWE SVKGRLRKGG QDSDQLGPPP AADPRAREFH PLGHILDHAE FSGHFALDTD
KHV