Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2635 |
Symbol | |
ID | 6878634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2619236 |
End bp | 2619784 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642790492 |
Product | lipopolysaccharide transport periplasmic protein LptA |
Protein accession | YP_002221036 |
Protein GI | 198284715 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.317916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTACG CGGTGCGTAT ATTCCTTAAG CGACTTTCAT TCCAGCGCTA CTGGCCGTTT CTGCTCGCAG TCCTTTCGGC CAGTGCCCTG GCCGCACCTA TTGCGGAGCA GGGACTGGGC AAGGGCCCGA TTCAGATCAG TGCCGATGCG CTGCATGGAG AAAATAAACC CCAGCAGCAG GCCGTCTATA CCGGGAACGT GGTCATGACC CAGGGCGATG TGGTCGTACA TGCCGATAAG CTCACCGTCG ACGCGATTGC CGGCAAGGTG CATCAGGCTA CGGCGGTGGG GAGCCCGGTC ACCTTCACCA TGTCCGCAGC GCAGCGCCAC GGCTATGGCG ACACCCTGGT CTACAAGCCT GGCAAGGGCG AGATCGTGCT CACGGGTAAC GCCCATCTCT GGCAGAAAAA GAACGAGATC AGTGGGCAGC AGGTCACTTA TTTCCTGCAG ACTCAGCAAA CCGCCGTCAC CGCGGCACCC GGTAAGCGTG TGCAATCGAT CTTTTATCCC GCTGCGGCGG GCCGCTCCGC TGGCGGTGGG AGGCCATGA
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Protein sequence | MRYAVRIFLK RLSFQRYWPF LLAVLSASAL AAPIAEQGLG KGPIQISADA LHGENKPQQQ AVYTGNVVMT QGDVVVHADK LTVDAIAGKV HQATAVGSPV TFTMSAAQRH GYGDTLVYKP GKGEIVLTGN AHLWQKKNEI SGQQVTYFLQ TQQTAVTAAP GKRVQSIFYP AAAGRSAGGG RP
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