Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2620 |
Symbol | |
ID | 6878619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2605863 |
End bp | 2607173 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642790477 |
Product | Capsule polysaccharide biosynthesis protein |
Protein accession | YP_002221021 |
Protein GI | 198284700 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3562] Capsule polysaccharide export protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAATT TTCTCTTTCT GCAAGGCGTC GCCAGCCCCT TTTTCGCACT GCTCTCCGAT CGCTTGCGCG AACGTGGCCG GAACGTGTTC CGGATCAACT TCTGCGCGGG AGATGTGGCC TACTGGTGGC CTCGGCCAGC AGTAGCGTTT CGCGGCAAGG TGGATCAGCT GGGGCCTTTT CTGAACCGGT ATCTTGGGGA TCATCACATT ACCGATATCG TTCTCTTCGG CGACCGCCGG CCTATCCATC AAACCGCAAT CGCCCTTGCG CAGGAACGCG GCATCACCGT CCATGTCTTC GAGGAGGGCT ATCTACGCCC CTACTGGATC ACCATGGAGC GTGGCGGGGT CAATAAGCAC TCCCAGCTTC CCAAAGATCC CCACTGGTAC CGCCAAGTGG TGGCGCAAGC GCCCTTGGGC CCGGAGGGAA GGGAGTTCCC CGGTAATTTT CGACTGCGCG CGATGCGTGA TGTTTTTTAT CACGCGGGAG ATATCTTCAA TCCCATTGCT TTTCGGGGTT ATCGGCACCA TGCGCCCGTC CATCCCATAC GCGAATATTA CTGGTATATC CGGCGCTTCC CGCGCATCAA AAAAAGATTG AAGACAGATT TGGCTGCGAC TTATGACTTT GTGCGGCAAG GCAAACCCTA TTTTCTGTTA CCACTTCAAC TCTATAGTGA CAGCCAGATC ACCTGTCATT CCAGCTTTTG CGATATGTAT GAGTTTATCA CCACGACGTT GACCTCTTTT GCCTCCCATG GGGATCGGGA TCTGCATCTG GTGGTAAAAA ATCATCCCCT CGATCCCGGC ATGCAGGCCT ATGAGCCATT CGTTGCGGAG CTCGCCGCCA AACTGGGCAT CGCCCGTCGC GTGCACTATT ACGATTACGG TGATCTGCTA CTGCTGCTGG AGCACAGCAA GGGGGTCGTC ACCATCAATA GCACGGTGGG TACCTGGGCC CTCAATTTAG GAAAACCCGT ATTGGCGCTG GCCGACCCCG TTTATCATCT GCCAGGTCTG ACGAGTGAAA TGCCCTTGGA TCTGTTCTGG AATGCCCCTG ACGCGCCAGA CCCGGAGTTA TGGAGCGCTT TCAGGCGCGT GCTCATCCAT ACCACACAAA TCAATGGCGG ATTTTATTGC CGTGCCGGAA TGGACCTGGC TCTGGATACT GCAGTGGATC GCCTGGAACT TGTTCAGTCC CCACTAGAGG AACTCTTATG CCGCATCGAC ATCCCAAAAG CATCCTTATC ACCGGCGCAA CCAGCGCCAT CGGCTCCGCC CTCGCCCTGG CCTACGCCAC ACCCGGTATA A
|
Protein sequence | MKNFLFLQGV ASPFFALLSD RLRERGRNVF RINFCAGDVA YWWPRPAVAF RGKVDQLGPF LNRYLGDHHI TDIVLFGDRR PIHQTAIALA QERGITVHVF EEGYLRPYWI TMERGGVNKH SQLPKDPHWY RQVVAQAPLG PEGREFPGNF RLRAMRDVFY HAGDIFNPIA FRGYRHHAPV HPIREYYWYI RRFPRIKKRL KTDLAATYDF VRQGKPYFLL PLQLYSDSQI TCHSSFCDMY EFITTTLTSF ASHGDRDLHL VVKNHPLDPG MQAYEPFVAE LAAKLGIARR VHYYDYGDLL LLLEHSKGVV TINSTVGTWA LNLGKPVLAL ADPVYHLPGL TSEMPLDLFW NAPDAPDPEL WSAFRRVLIH TTQINGGFYC RAGMDLALDT AVDRLELVQS PLEELLCRID IPKASLSPAQ PAPSAPPSPW PTPHPV
|
| |