Gene Lferr_2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2617 
Symbol 
ID6878616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2595967 
End bp2603427 
Gene Length7461 bp 
Protein Length2486 aa 
Translation table11 
GC content64% 
IMG OID642790474 
ProductBeta-ketoacyl synthase 
Protein accessionYP_002221018 
Protein GI198284697 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases
[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3321] Polyketide synthase modules and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAACC AAAAAATTGC CGTCATCGGC TACGCCTCAC GCTTGCCGCA AACGTCTGAC 
GCCACTTTCT GGGAGGACTT GCTGGCGAGG CGGGATCTGG TGACTCGGGT CGCAGAGGAC
CGCTGGGCCA CGGCGAATCT GGAGCATCCC CAGCGCACCC ATCCGGGGAC TTCGGTGACT
TTCGCGGCGG GTTCGCTGGG GGACGTAGCG GGCTTCGACG CGGGGTTTTT TCGCATTTCG
CCGCGCGAGG CGGCGGCCAT GGATCCGCAG CAGCGCCTGT TGCTGGAGAT GAGTTGGGAA
GCCTTTGCCC ATGCCGGAAT CGCGCCTTCC TCTTTGCGCG GGAGTCGTTG CGGCGTCTTT
ATGGGTTTGG CCAGTACCGA CTACGCGTAT AGGTTGGCCG ATGATCTGGC GGCTATCGGG
TCTAACTCGG CTACGGGTTC GACGGCGAGT ATTGCCGCAA ACCGGCTGTC TTACTTTTAT
GATCTGCGGG GGCCGAGTCT GGTGGTGGAT ACGGCCTGCT CATCGGCGCT GGTAGCCTTT
CATCAGGCCT GCCAGTCGCT GCTGCGCGGT GAGAGCGAGT TGGCGCTGAC CGGAGCCATC
AGCCTGCATC TGCATCCTTA TGGCTTTCTG ATTTTTTCCA GGGCATCCAT GCTCTCGGCG
AGCGGCCGCT GCCGACCCTT TGACGCTGCG GCCGATGGCT ATGCGCGTGC GGAAGGCGGC
GGGGTCTTCG TGCTCAAGGG CTATGATAAG GCCCTGCGCG ATGGCGACCG GATCCTGGCG
GTGGTGACCC ATACCGCCAT CAACACCGAT GGCCACAAAG GCGGACTGAC GATTCCCAAC
GTCGACGCCC AGGCCCAGCT TTTGGAAGAG GCCTATGCTG CGGCGGGTAT CCACCCTGAG
GCGATCGACT ACGTTGAGGC CCATGGTACG GGAACCACGG TGGGCGATCC CATCGAGGTG
GCGGCCATTG GACGGGCGCT GGGCCGCCAT CGCGACCCTC GGCACCCGCT GCCCGTTGGT
TCGGTAAAGA GCAATCTGGG CCACCTGGAG ACCGCTTCCG GCGTGCCCAG CCTGATCAAG
GCCATTCATT GCCTGCAGAA ACGCCGGGTG CCCGCCACCA TCGGCGTGGA GCGTCTCAAC
CCACGGCTGG AATTGACGGA AAACCGCCTG GAGGTGGTGA CGGAGAACCT CGCCCTGAAA
GGGGAGGGAC GGCTGGTGAT CGGCGTGAAT TCGTTCGGTT TTGGCGGCGC CAATGCCCAT
GTGATCCTCG AAAGCGCTGA GTCGGTACAG GCGGAAGAAG ACACTCCTGC GCCCGACGCC
CCCCGCCCCC TACCCCTGGT ACTGACGGCG GCGACCCCTG CGGCGCTCCA GCAGGTGGCG
GGGGATCTGG CCCGGGTTTT GGCGGCGCAA CCGGAGACCT CCTGGTACGC CACGCTGTAT
CAGGCCACTT TTCGCCGGGA CTGGCTGCGT CACCGAGCGA TTTTTTGGCA CGAGGGCCAC
CATGGCCTTG TGGACCATCT GGCTGCCTTC GCCGCCCATG ACGACAAAAG CGGGGGGATC
GTCATGGACA CCGCCCTGGC AGATCCCCAG GGTCCGGTTT TTGCGTATTC CGGAAACGGC
TGCCAATGGT TCGGCATGGG TCGTTCGTTG CTGTCCGAGC CGATATTCCG ACAGGCCATC
GAAGAGATCG ATGCCTTTTT CTTCCCTCTG GCGGGGTATC GTCTCGTCGA TGATCTGGCG
GGGTCTTTGG GCGAGGATCG CTATGCCCTG ACCGGGCATG CCCAGCCGGC CCTTTTTGCC
CTGCAGGTCG GCATCACCCA AATGCTGCGC TCCTGGGAGG TGCGGCCGGT GGCGGTAACT
GGTCATAGCG TGGGAGAAGT GGCGGCGGCA TGGGCCTGTG GCGCCTTGGA CCTGGAGGAT
GCGGTTCGGG TGATTTTCCA TCGCAGCCGT TTGCAGGAGC AGAGCCGGGG GCAGGGGCAG
ATGACGGCGG TGGCTTTGGC TGCCGACGCG ACGCGGAAGC TGCTGCGGGA ATGGGATCTG
GCGGAAGTGT TGCACATTGC GGCCTGGAAC AGCCCGCGCG GCGCTACCGT CGTCGGCCCC
ACGGTGGCCT TGAGCGAGAT GGAGGCTCGC CTGCGCGCGC AAGGGACTGC GTGTAAGCGT
CTGGACATCG AGTATCCCTT TCATAGTCCC GTGATGGAAA ATGTCCGGGA AGAACTTTTC
GGTGCTTTGT CCGGATTGCG ACCGGGCAGG GCCCATATCC CTTTCTACTC TTCGGTCAGC
GGTGCCAGCC TACCGGGGGA AACCCTCACC GCGGACTATT GGTGGGCCAA CATCCGCGAC
CCCATCCGTT TTCAACAGGC CACGGAACAG ATGCTGGCCG GCGGCTTCAA TGTCTTTGTA
GAGCTGGGAG GGCATCCGGT TCTGCGCGGC TATCTACAGG ATGGCTTGAC CCAGGGCGAA
CGGGAGGGGC GTATCATCGC CACGTTGCGG CGCGGCGATG ATCATCCGCA ACGGATTTTG
GCGGCGGTCC AACAGGTATT CATTACCGGG GTTCCGGTGG AATGGCCACG TTTTTACCCC
AAGCCTGGTC CTTTTGTGGA TTTGCCTCAT TATCCATGGG AGCGGGAACG CTACTGGCAC
CCGGTCACCG CAGAATCTGC CGGGACGCTC TATCGATACC CGGTGCATCC CCTCCTGGGG
CATCCCGTGC CCCAGCATGA CCATGAGTGG GAGCAAGACA TCGATACGGC CCGCTTGCCT
TTTCTGGCGG ATCATCGGGT TGGGGAGGGT GTGATTTTCC CTGGCGCGGG TTATGTGGAG
CTGTTTCTTG CGGCGGCCCG TCAGCGGGGC GATGAAAGCG CGCTCCTGGT GCTGGAAGAT
TTGGAGATAT GGGCGCCTCT ATCGTTGAAC GAGGAAAGTG GCAAGGTTTT GCGGGTGACT
TTGGATGCGG CCAGTGGCGA GGTCCAGGCC CTCTCCCGCG ACCGCCTCGC CCAGGACTGG
ACGCTGCACG CCAAGGCCCG CATCGTTGCG GAGCGGACGG ATCTGCGCCT GCGTCGGCCG
GCCATGGAGA GGCCCGAGGG CGCACCGGAC TTTGATGGAG AACAACACTA TCGCCTCGCG
GAATCCGTTG GGCTTCTCTA CGGGCCGAAC TTCCGGACGG TGACCCAAGG CTGGGTCCGT
GGTGATGCGG TGTGGGCGGC GATGGCCTTG CCCTCGGACA TCGCCGCCTT CGAGTCCGGC
TTTCACCTGC ATCCGGCGCT CCTGGACGGC GCTTTTCAGC TTGTCATCGA CCTCTTGCGC
GACAATATCG TCGACCATCC GGGAGTGGCG TTCGTACCCA TTCGCATGGG CAGGATCACG
CTACGGCAAC CGCTGACCCA AGTGGCCTGG GCCGGCGCGC GATTGCTCCG CCGTTCGCCC
CAATCCATCC TGGCGGAATT CACCCTGATG GATGCCGCGG GAACGGTGGT CGCGCTGTGC
GAAGGGGTAC GCATGCGGCA GGTGAAGTTG CTGCGTACTC CGGATGAGCC ATTGAGACTC
ATCGGCACGG AACTCGTCGC CATGCCGCGC CGGGAAGCGC TGCAAAAGGC ACCCCCCTTG
CCCGTCGCGG CGCTGGCGGA GGCATTGCAG GCGGCTCTGG GGAGGGGGGA CGTTCAGCAT
GCCCTGGGCC GCTATCGGGA CGAATATGCA CCCCTTCTGG ACGCGCTGCT CCAGGCATTT
CTGCGCGAGA GCTGGGGCGA GGCCGTAGCA GAGACCATGC CTGCATTTGC TGACGAAGAG
CCCATTTCCG CCGGGCAGAT TTGGGTGACC TTGATTCGGG ACTATCCGGA ATTCTCTGCC
CTCACCCTAC AGGTGGGGCG CGCGGGCATG GCGCTTGCCG CCTCTTCCGC GAACGATGGG
GACGATGATC GCGCGGCTGC ACCGCCCCTG GATCCCGACC TTTGGGTCAG GACTATCCTG
CAAACCATCG ATGGCCCCAT CCACGCGGCA GTCACGCGTT TTATGCAGGA ACGATGCGCC
CAACTAGCCC CCTCCTCCCG CCTGGGGATC ATGGAGATCA ACGCCCATGG GCCTGATTGG
ATAGTGCAGG TGGCGGAGGC CCTTTCCGGG GAAAATCGCT GCGACCTGTA CTACGCGGGT
CCCGGCGCAG AGATTCTGGA GTCCCAGGCG GAGATGGCCC GCGAGGCCCA ATGGCAATCC
CTGGCCATTC CCGCGGCGGG CACCTTATCC GCGCCAGACC CACGGCCCAC CGTGCATTTC
GCCTGGATGC AGGTGGACGG GGATGCGGAT ACCACCGCAC AAATGATCCA TATGGCCCAG
GACTGCCTTG CGCCCCAGGG GTTGCTGTTT TTGTTGGGCG TGCATCCTGA GCCCTGGATG
TCGGCCCTGG CGGAGTGTCG GGATGCCGAC GCCGGACAGT CTCTGACCGA AGCCCAACTG
CAGGCGAATT TGCAGCAGAT GGGCTTCGTG GACGCTCGAT CATTGGACCA GGATAATGCG
CTGCGCACGG GTCCCTACCT GCTTCTCGCC AGGAAAAGTG AGGATGCCCT TCCGACTGCC
CAGACCGAGC CGGGCGGCAA GGGCCGGTGG CTATTGGTGG GGGACAAGGC GTGCGGCGAT
GACCACCAGT CCCCCTGGAT GGCGGCGTTG AAATGGGGAT TTGCCCAGCA AGGCTTCAGA
ACGATCACGC TGGAGGCGGC GAGCGTGCAG GAACTGGAAG ATTCCCTGCG CGTTCTGTTC
AGGGAAGAGG TGGGTGCTTG GGAGGGTGTC CTGTATTTCC CCGGACTCTT TCCGGCCCCG
GACGAGATGT CCGTGGGCCG CTTGCTGGGG GAGCAATGCC AGAGTCTGCG CACCCTCAGC
CAGTGGGCCT TGGGCCAGGA GGAGCCACCC CCGGTATGGG TGCTCACCCG TCATGGCCTA
TCGACACTGT ACCCTTCTCC CCTGCCGCCC GCCATGACGG ATGGGATGGT GCAACCCCTC
CACGGAGCGG GCCTCACCGG CTTTGCGCGA ACCCTGCAAA ACGAACTGCC GGAGCTCGCC
CTGCGCGTGC TGGACCTGAC CGAGAGCGGG CCCACCCCCC CATTGCTGGA ACATCTCGTG
CGGGAATGCG TCTGTCCCGA TAGCGAGACG GAAATCGTTC TGGACGGACA TGGGGGCAGG
TACGCACCGC GGGTGCGGGA GAAACCCGCC CTGGAGATCA CGACCAGAGC GCCTCGGCAA
CTGCGTTTTG CCGCGCCGGG GCAGTTACGC AATCTTCATT GGGCACGTTT TAACCCTCCG
GACCTGGCGG AAGACGATGT GGAGGTGCTG GTCGGCGCCA CGGGCTTGAA TTTTCGGGAC
GTGATGTACG CCTTGGGGAT GCTGTCGGAT GAAGCCTTGG AAAACGGCTT TTCAGGGCCG
GGCCTGGGAC TGGAGTTCGC CGGGACGGTC GGTCGAGTGG GAAAAGGAGT CTCCCATGTA
GCGCCGGGCG ATAGAGTGGT GGGCTTTGCT CCCGCCAGCT TCGCCACCCA TGTGGTCACC
AAGGGCTATG CGGTCACGCG GCTGCCCGAG CATCTGGGTG TGGAGGCCGC GGCCACGATC
CCGACGGCCT TTCTCACCGC CTGGTATGCC TTGATGGAAC TGGCTCGCTT GCAGCCGGGG
GAGCGGGTCT TGGTCCATGG CGGCGCGGGT GGCGTGGGTA TCGCTGCGAT TCAGATGGCC
CAGTGGCGGG GCGCCGAAGT ATATGCCACG GTGGGCTCGC CCGAGAAGCG GGATTTTCTA
CGCCTCTTGG GGGTGAGCCA TCTGTACCAT TCCCGGTCTT ACGACTTTGC CGAGGAGATC
TGGCGAGACA CGAACCAGGA AGGAGTAGAC GTGGTGCTCA ATAGTCTCTC CGGTGAGGCC
ATTCGCCGCA ATCTGCAGAT ATTGCGTCCC TTCGGGCGAT TTCTGGAACT GGGCAAACGC
GACTTCTACG AAAACACGGC CATGGCTTTG CGCCCTTTCC GCAATAACCT CAGTTACTTC
GGGATCGACG CGGATCAGTT GATGCAGCTA CGCCCCACGC TGACCCAGGA AATGTTTGGC
CGGGTCATGG AGCGTTTTGC CGCTGGGGAT TTTTTTCCGC TGCCCTATAC CTGCTTTCCG
GCCCGCTCGG TCGTCCCGGC CTTCCGTCAT ATGCAGCAGG CACGCCAGAT CGGCAAGATC
GTGGTGACCA TGGAGGAGCC CCTGCTCCCT GTGGTGAATG ATAACCGCCT CCGTGGCGAA
CCGCTGCAGC TTGCCGCGGA TGGGGTCTAT CTGGTGACCG GGGGGCTTTC CGGTTTTGGT
CTGGAAACGG CACGACGCCT GGCGGAGCGC GGCGCCCGCA AGCTCGTGCT GATCTCGCGA
TCCGGCCGGA TGGATGGGCA TGCCCAGGAG GCGATGACCC TCATGCGCTC ATGGGGCGTG
GAGATCCTGG CGTTGCGCTG CGATGTCACC GATCCCACCC AGTTGGCCGA TCTTTTTGCG
CGCATAGCGC TGGAATTGGG TTCATTGCGG GGGGTCATCC ATGCCGCGGC AGTCATCGAC
GACGCGTTGG CGCAGAACCT CAGCGAGGAA CAAATCCAGC GGGTCTTGGC CCCCAAGGTA
CAGGGCGCGC TCCATCTGCA CCACCTCACC CAAACCCTAC CCCTGGATTT TTTCGTGCTC
TATTCTTCGG TGACGACGAT TCTGGGGAAC CCAGGGCAGG CCCATTACGT GGCCGCGAAC
ACCTGGATGG AAGCCCTGGC CCGGCAGCGG CGCGCCCAGG GTTTGCCGGC CACCGCCATA
TTATGGGGCG CCATTGGCGA TGTGGGTTTT TTGGCGCGCA ACAACAAGAC CAAGGAGGCC
CTGCAGCAAC GTCTGGGCAG CGCCCCCATG TCGTCGCGGG CGGCCCTGGA TTGGCTCGAG
GAGATCCTGG CCAGGGACGT GAGCGGCGAT GCGGTGGTGG ATTGGGATTG GCGTGCGATT
CGCCGTTTTC TGCCCATCGC GCAGTCCCCC AAGTTCTCCC CGTGGAATCT GGACATGGGT
CATGACGAGT CGGCGGATTC CACCGACGAG GATCTGTGCG GATACCTGCT CTCTCTGCCG
GATGACGAGG CGGTCTCCGC CATCACGGAT CTCCTCCGTC GGGAAGTCGC GGAGATTTTG
CGCCTGCCCA TGGAAAAGAT CGAAGCTGCC CAGAGCCTGT CCCAAATCGG TCTGGACTCC
CTCATGGGCG TGGAACTGGC CTTGGCGCTG GAACAGCGCC TGGGCGTCAA GCTCCCCTCC
CTGCTGCTCG CCGAAGGACC AACGCCGGCC AGACTCGCCG ATCGCGTGCT TCAGGAGTTG
CGCAAGAGAC AAGGCTCAGG TGAAGATCCG CAGGTCGCGG CGATGGACGA GGAAGATGTG
CGCCGACTGG CGGGGCTGCA CGGCGTCGAG GCCCAGGCAC CAGCCCTGGA TGGATGGGTC
ATGAATGGGG AGGGGCGCTG A
 
Protein sequence
MRNQKIAVIG YASRLPQTSD ATFWEDLLAR RDLVTRVAED RWATANLEHP QRTHPGTSVT 
FAAGSLGDVA GFDAGFFRIS PREAAAMDPQ QRLLLEMSWE AFAHAGIAPS SLRGSRCGVF
MGLASTDYAY RLADDLAAIG SNSATGSTAS IAANRLSYFY DLRGPSLVVD TACSSALVAF
HQACQSLLRG ESELALTGAI SLHLHPYGFL IFSRASMLSA SGRCRPFDAA ADGYARAEGG
GVFVLKGYDK ALRDGDRILA VVTHTAINTD GHKGGLTIPN VDAQAQLLEE AYAAAGIHPE
AIDYVEAHGT GTTVGDPIEV AAIGRALGRH RDPRHPLPVG SVKSNLGHLE TASGVPSLIK
AIHCLQKRRV PATIGVERLN PRLELTENRL EVVTENLALK GEGRLVIGVN SFGFGGANAH
VILESAESVQ AEEDTPAPDA PRPLPLVLTA ATPAALQQVA GDLARVLAAQ PETSWYATLY
QATFRRDWLR HRAIFWHEGH HGLVDHLAAF AAHDDKSGGI VMDTALADPQ GPVFAYSGNG
CQWFGMGRSL LSEPIFRQAI EEIDAFFFPL AGYRLVDDLA GSLGEDRYAL TGHAQPALFA
LQVGITQMLR SWEVRPVAVT GHSVGEVAAA WACGALDLED AVRVIFHRSR LQEQSRGQGQ
MTAVALAADA TRKLLREWDL AEVLHIAAWN SPRGATVVGP TVALSEMEAR LRAQGTACKR
LDIEYPFHSP VMENVREELF GALSGLRPGR AHIPFYSSVS GASLPGETLT ADYWWANIRD
PIRFQQATEQ MLAGGFNVFV ELGGHPVLRG YLQDGLTQGE REGRIIATLR RGDDHPQRIL
AAVQQVFITG VPVEWPRFYP KPGPFVDLPH YPWERERYWH PVTAESAGTL YRYPVHPLLG
HPVPQHDHEW EQDIDTARLP FLADHRVGEG VIFPGAGYVE LFLAAARQRG DESALLVLED
LEIWAPLSLN EESGKVLRVT LDAASGEVQA LSRDRLAQDW TLHAKARIVA ERTDLRLRRP
AMERPEGAPD FDGEQHYRLA ESVGLLYGPN FRTVTQGWVR GDAVWAAMAL PSDIAAFESG
FHLHPALLDG AFQLVIDLLR DNIVDHPGVA FVPIRMGRIT LRQPLTQVAW AGARLLRRSP
QSILAEFTLM DAAGTVVALC EGVRMRQVKL LRTPDEPLRL IGTELVAMPR REALQKAPPL
PVAALAEALQ AALGRGDVQH ALGRYRDEYA PLLDALLQAF LRESWGEAVA ETMPAFADEE
PISAGQIWVT LIRDYPEFSA LTLQVGRAGM ALAASSANDG DDDRAAAPPL DPDLWVRTIL
QTIDGPIHAA VTRFMQERCA QLAPSSRLGI MEINAHGPDW IVQVAEALSG ENRCDLYYAG
PGAEILESQA EMAREAQWQS LAIPAAGTLS APDPRPTVHF AWMQVDGDAD TTAQMIHMAQ
DCLAPQGLLF LLGVHPEPWM SALAECRDAD AGQSLTEAQL QANLQQMGFV DARSLDQDNA
LRTGPYLLLA RKSEDALPTA QTEPGGKGRW LLVGDKACGD DHQSPWMAAL KWGFAQQGFR
TITLEAASVQ ELEDSLRVLF REEVGAWEGV LYFPGLFPAP DEMSVGRLLG EQCQSLRTLS
QWALGQEEPP PVWVLTRHGL STLYPSPLPP AMTDGMVQPL HGAGLTGFAR TLQNELPELA
LRVLDLTESG PTPPLLEHLV RECVCPDSET EIVLDGHGGR YAPRVREKPA LEITTRAPRQ
LRFAAPGQLR NLHWARFNPP DLAEDDVEVL VGATGLNFRD VMYALGMLSD EALENGFSGP
GLGLEFAGTV GRVGKGVSHV APGDRVVGFA PASFATHVVT KGYAVTRLPE HLGVEAAATI
PTAFLTAWYA LMELARLQPG ERVLVHGGAG GVGIAAIQMA QWRGAEVYAT VGSPEKRDFL
RLLGVSHLYH SRSYDFAEEI WRDTNQEGVD VVLNSLSGEA IRRNLQILRP FGRFLELGKR
DFYENTAMAL RPFRNNLSYF GIDADQLMQL RPTLTQEMFG RVMERFAAGD FFPLPYTCFP
ARSVVPAFRH MQQARQIGKI VVTMEEPLLP VVNDNRLRGE PLQLAADGVY LVTGGLSGFG
LETARRLAER GARKLVLISR SGRMDGHAQE AMTLMRSWGV EILALRCDVT DPTQLADLFA
RIALELGSLR GVIHAAAVID DALAQNLSEE QIQRVLAPKV QGALHLHHLT QTLPLDFFVL
YSSVTTILGN PGQAHYVAAN TWMEALARQR RAQGLPATAI LWGAIGDVGF LARNNKTKEA
LQQRLGSAPM SSRAALDWLE EILARDVSGD AVVDWDWRAI RRFLPIAQSP KFSPWNLDMG
HDESADSTDE DLCGYLLSLP DDEAVSAITD LLRREVAEIL RLPMEKIEAA QSLSQIGLDS
LMGVELALAL EQRLGVKLPS LLLAEGPTPA RLADRVLQEL RKRQGSGEDP QVAAMDEEDV
RRLAGLHGVE AQAPALDGWV MNGEGR