Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2616 |
Symbol | |
ID | 6878615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2594171 |
End bp | 2595745 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642790473 |
Product | glycosyl transferase group 1 |
Protein accession | YP_002221017 |
Protein GI | 198284696 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAATG CGAACAACAA TCTCCGTGTT CTCATGGAAA TGCGCCCTGC CCTGGATGGC TTTTATGGTA TCCCGCAGGA AACCCGCCTG CTTTATGGGG TGCTTTCCAC CTTGCCGGAT TTGGAGCTAT CCGGCCTGCT CCAGATGTCC AAACGCAGCG TGCGCGGCGG GGTGTATGGC CGTGTGTCGC TTTCCGAGGC AGAGCGGGTG CATCGCTTTG CGCGGGTGGT GGTATCCCTC AAGGGCCGCA GCGCATTGGA CTGGAAAAGC GATGTCGCCG AGTGGCTCGA TAACTACTGG CAGACCTGGC GCTTGCGCTG GGGTGCCTGG ACCGGGCTGG GGCGGATTCC CTTAGGGCAC TTTGAGACCC GGCATTTCCG CGATTTCGTC TGGCAGGAGC TTTATGGCCG GAGCCTGCCC GCTGCCGATC GTGAACAGGT ATTGCAAAGC GATTACCGGG TTTGTGCCTA TCCGTGGCGG CGCATGCATC TGGTGGGTAT CGAGCGGGCG CAGGTCTTGT CCCATTCCCG CTATCCGGTG CTGGATACGC GGGGGCTGGA TGTTTTCGTG GCGCAGACGC CTTTCCCTGG ACGGGTAAGC GCGGGCACGA CGCTGGTGGT GCATTACCAC GATGCCATCC CGGTGCTCAT GCCCCATACC ATCTCCGACC GCGCCTTTCA TCAAAGCAGT CATTTTCAGG CCATGGCCGC CAATGTGCGC TCCGGCGCGC ACTTCGTTTG CGTGTCCGAC GCCACCCGGC GCGATCTGCT GAGTCTCTTC CCCGAGGCGG AGGCGCGGGC CCACACCATC CACAATATGC TGCCCGCCCA CTACTATCCC GCAGAGCCTG AGCCCGAGCG GATACCCGAC ATCGTCCGCC GTCATTTGCA TGGCGAGTAT GAGGGGAAGG TGCGGGGTAC GGTGAAGGAT AAGACCAGAA TCTATCCGCT GGCCCGCGTC TTCAATAACG AAGAGGAGAA AACCGCCTTT TATGCCCGTG CCCTGGGGCC GGGAACGCGC TTCGTGCTCA TGGTCTCCAC CATCGAGCCG CGCAAAAACC ACGCCCGTCT GCTGGCCGCA TGGGAAGCCT TGCGCGGTAC GCTGGATCCG GAGCTGAAGC TGATTCTGGT GGGGCATATC GGCTGGGATT ACCAGACTGC GCTGGAGGAC TTCCTGCCGT GGATCGAGCA GGGTAGCCTC TTCCTGCTGC ATGGTATCCC CGCCGACGCC CTGCGTCTGC TCTACCGGCA GGCGGTGGTG ACCGTCTGTC CCAGCGTGGG GGAAGGCTTT GATTTCTCCG GCGCGGAGGC CATGCGCTGC GGCGGTGTGG TAGCCGCCTC CGACATTCCG GTGCATCGCG AGGTCTATGG CGAAGCGGCC CGATACTTCG ACCCTTACGA TACCGCCAGC CTGGCAGGAA CCCTGCGTCA GATCATCTAC AGTCCCGACG CCGATGCCCT GCAAGGCCAA CTCCGCGCCA GTGGCGCCGT CCAAAGCGCC CGCTACCTGC CCGAACGCAT CCTGCCCCGG TGGGAAGCGT TTTTGCGGGG AGCGAAACAG GGACAGACCT CATAA
|
Protein sequence | MDNANNNLRV LMEMRPALDG FYGIPQETRL LYGVLSTLPD LELSGLLQMS KRSVRGGVYG RVSLSEAERV HRFARVVVSL KGRSALDWKS DVAEWLDNYW QTWRLRWGAW TGLGRIPLGH FETRHFRDFV WQELYGRSLP AADREQVLQS DYRVCAYPWR RMHLVGIERA QVLSHSRYPV LDTRGLDVFV AQTPFPGRVS AGTTLVVHYH DAIPVLMPHT ISDRAFHQSS HFQAMAANVR SGAHFVCVSD ATRRDLLSLF PEAEARAHTI HNMLPAHYYP AEPEPERIPD IVRRHLHGEY EGKVRGTVKD KTRIYPLARV FNNEEEKTAF YARALGPGTR FVLMVSTIEP RKNHARLLAA WEALRGTLDP ELKLILVGHI GWDYQTALED FLPWIEQGSL FLLHGIPADA LRLLYRQAVV TVCPSVGEGF DFSGAEAMRC GGVVAASDIP VHREVYGEAA RYFDPYDTAS LAGTLRQIIY SPDADALQGQ LRASGAVQSA RYLPERILPR WEAFLRGAKQ GQTS
|
| |