Gene Lferr_2590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2590 
Symbol 
ID6878589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2566838 
End bp2568007 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content60% 
IMG OID642790447 
Productglycosyl transferase group 1 
Protein accessionYP_002220991 
Protein GI198284670 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.998711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTGG GTGACCGCCC CTTATTGATT GATGTTACGC GCTTGATAGA GCGGGCGCGT 
AAAAAGCGCA TGCCCACCGG CGTGGACCGC GTCTGTCTGG CTTATATCGC CTTTTTTCAC
CATCGCGCCC AGGCCCTGAT GCAACACGGA GCTATCGCCG TGGCATTGTC GCCCGCCGCG
TCGTTTGCCC TTTTCGCCTG GCTCCTGGCT TGGCGAGAGG GCAAGCCGCA TCCCGCCCTG
GGGCCGACCA TGGCCTGGCT GGCGAGGCTT CCCTTGCGCC CCGTGCCCAA GGGAAGTTGG
GTATTGAACA TGGGGCACAG CGGCCTGGAC CGTCGGGGTT ATGGCGCATG GATGGCACGC
AAACAGATCC GCTTGCTGGT GATGGCCCAT GACCTGATCC CCCTCACCCA CCCCCAGTTC
TGCCGCCCAG GAGAGGATGA TCGGCATGCC GCGCGCCTGC AGGTGATCCT GCGTCATGCG
GCGGGTATCG TCAGCAATTC TCAACACACG GCGCGTGTTT TGCGACATTA TGCCCAACAA
TGGGGCGTTA CCCTGCCGCC CATTTCGGTG ATTCCTCTGG GTGCCAATCA TCTTCGACAC
GCTCCACCGC CTGCAAGCCA TGAGCCTTTG TCAGCGCCTT ATTTCCTCAT GGTGGGCACC
ATAGAACCGC GTAAGAATCA TCACTTTGTC CTGGATCTGT GGCGCGAGTG GAAAAGCCGC
CAGGCCGATG TGTCGTTGCT GGTGGTGATT GGTCAGGTAG GGTGGATGTG CGAGGATATT
CTGGAACAGT TGCGCGCGGA CGCGATCCTG AAGGATTCGG TACGGGTATT ACACCATTGC
CGGGATGACT GTCTCTGGGC TTACCTGCAG AGCGCGCGTG CCTTATTGTT CCCTTCCCAC
GAGGAGGGTT ACGGCCTACC GCTGGTGGAG GCGTTGGCGT TGGGAATTCC CGTCATTGCC
AGCCCGCTGC CCGTTTTCCG GGAGATCGCC GGAGACGTGC CCGATTATAT CGAAACCTCG
GATACTTCGG CCTGGCTTGC CGCCTTGAGC GACCATAGCC TCCCCGATAG CCCCATGCGC
CAGGGGCAAC TGGAGCGCCT GCGGCATTTT TCTCCCCCTA CCTGGGAGCA ACACTTTCAG
CAGTTCACCG AGTTCATGAG CCGCTTATGA
 
Protein sequence
MNLGDRPLLI DVTRLIERAR KKRMPTGVDR VCLAYIAFFH HRAQALMQHG AIAVALSPAA 
SFALFAWLLA WREGKPHPAL GPTMAWLARL PLRPVPKGSW VLNMGHSGLD RRGYGAWMAR
KQIRLLVMAH DLIPLTHPQF CRPGEDDRHA ARLQVILRHA AGIVSNSQHT ARVLRHYAQQ
WGVTLPPISV IPLGANHLRH APPPASHEPL SAPYFLMVGT IEPRKNHHFV LDLWREWKSR
QADVSLLVVI GQVGWMCEDI LEQLRADAIL KDSVRVLHHC RDDCLWAYLQ SARALLFPSH
EEGYGLPLVE ALALGIPVIA SPLPVFREIA GDVPDYIETS DTSAWLAALS DHSLPDSPMR
QGQLERLRHF SPPTWEQHFQ QFTEFMSRL