Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2579 |
Symbol | |
ID | 6878578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2549795 |
End bp | 2551624 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642790436 |
Product | glycosyl transferase group 1 |
Protein accession | YP_002220980 |
Protein GI | 198284659 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATCG TCATCGACTT GCAAGGCGCA CAAACACCTG GGAGCCGAAA TCGCGGTATC GGGCGTTATT CCCTATCTCT GGCTCTGGCA ATCGCTAGAC AAGGTGGGGA GCATGAAATT CTCATCATGC TAAATGGTGC GTTTCCTGAC ACGATAGATC CAATACGCCA GGCTTTCAAT GGCCTGATTC CAACCGATAA TTTCAGAATT TTATACGGAT TATATCCCTC GCGCGCTATT GATGCAGACA ACCGATGGAG GCGTCAAGCA TCTGAAAAAC TTTATGAATC GTTCATGTTG CAAATTGATC CGGATATTCT GTTGGTTAGC AGCCTATTCG AAGGTTTTCA TGAAGATGCC ATTACCAGCG TTAATAGCCA AGGCAAATAT GCGGTTGCTG TTATTCTTTA CGACCTAATT CTCTTAATTC ATCCCAAACC TTATCTAGAG AACCCTAGTG TTTCGGCTTG GTATCATGCT CGCCTTGACC ATCTTCGACG GGCTGATATC TTGCTTGCTA TATCCGAGTC TTCTCGTCAG GAGGCTATAA AATACCTAGA TGTTGAAGAC GGACAAGCGG TCAATATTTC CTGCTCAATA GATGGCTATT ACCGTCCGTT GTCGTTTTCT CTGGAGGAAC GGCGGCACAT AATGGAGCGA TACTATCTGA CCCGGCCATT CGTCATGTAT ACCGGTGGAA TAGACTATCG GAAGAACATC GAAGCACTAA TTAGTGCATA TGCAAAACTG TCTAACGAGA TTCGCCGTGG CCATCAATTG GCTATTGTCT GTTCGATTCT GGATCATGAT CGGAACCGTC TGGAAAAGCT CGCGCAAAAA TGTGGCTTGG GTGCTGGGGA ATTGGTGTTC ACTGGTTTTA TCCCAAGCGA TGATCTCCTG GCGCTCTATA ATCTGTGTCG CCTGTTCGTT TTTCCATCGT GGCACGAAGG TTTTGGGTTG CCGGTGTTGG AAGCTATGGC CTGTGGTGCG CCAACGTTGG CCTCCAATTG CAGCAGTTTG CCTGAGGTGG TCGGGCTGGA CGAGGCTCTA TTCGATCCCA AGGATGAGCA CGCTATCGTA GATGCTATGG AGCGCGCTCT GACGAATGAT GCGTTTCTCC AAAGACTTAA GGCGCACGGG TTGCAGCAGG CTAAAAAGTT TTCATGGGAC GCTAGCGCCC AACGTGCGTT ACAGGCAATG GAAACGCGGG TCAGCATGGC TAAATCCAGT CGGGCGGCTA CACCGCCACT GGCGAAAATA CCTCGCAAGC GACTGCGACT AGCCTATGTC TCGCCGTTGC CTCCTGCACA AACTGGTATT GCTGACTACA GTGCTGAATT GTTGCCAGAA TTGTCCCGCT ACTATGTCAT TGATGTCATC GTTGCCCAGC AAGAGCCGGT GACTGATCCT TGGGTTCTGG CTAATGCCGC TCAGCGCATG GCTGCGTGGT TTGACCAGCA TGCTGGCGAA TATGACCGCA TCCTCTATCA ATTCGGTAAC TCGCAATTTC ACCAACACAT GTTCGGCCTG CTGGAAAAAC ATCCTGGTGT GGTAGTGCTG CACGATTTTT TCCTCAGTGG TGCTTTGGTG CATATGGATT TACACGGAAT CATGCCGGGG ATTTGGGCGC AGGCCTTGCA ACGTTCCCAT GGCTGGCAGG CGGTTTGCGA ACGCTACTCA GAGACAGACA CCGCCGCAGT GATTTTCCGA TACCCCTGCA ACCTAGACGT TTTGCAACGT GCCCAAGGCG TTATCTGCCA TTCGGATTTT TCCCGTCGGC TAGCCATGCA GTGGTATGGG CCGGGCCAGG GCCCCGTCAA AGTCGCCTGA
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Protein sequence | MRIVIDLQGA QTPGSRNRGI GRYSLSLALA IARQGGEHEI LIMLNGAFPD TIDPIRQAFN GLIPTDNFRI LYGLYPSRAI DADNRWRRQA SEKLYESFML QIDPDILLVS SLFEGFHEDA ITSVNSQGKY AVAVILYDLI LLIHPKPYLE NPSVSAWYHA RLDHLRRADI LLAISESSRQ EAIKYLDVED GQAVNISCSI DGYYRPLSFS LEERRHIMER YYLTRPFVMY TGGIDYRKNI EALISAYAKL SNEIRRGHQL AIVCSILDHD RNRLEKLAQK CGLGAGELVF TGFIPSDDLL ALYNLCRLFV FPSWHEGFGL PVLEAMACGA PTLASNCSSL PEVVGLDEAL FDPKDEHAIV DAMERALTND AFLQRLKAHG LQQAKKFSWD ASAQRALQAM ETRVSMAKSS RAATPPLAKI PRKRLRLAYV SPLPPAQTGI ADYSAELLPE LSRYYVIDVI VAQQEPVTDP WVLANAAQRM AAWFDQHAGE YDRILYQFGN SQFHQHMFGL LEKHPGVVVL HDFFLSGALV HMDLHGIMPG IWAQALQRSH GWQAVCERYS ETDTAAVIFR YPCNLDVLQR AQGVICHSDF SRRLAMQWYG PGQGPVKVA
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