Gene Lferr_2559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2559 
Symbol 
ID6878558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2532497 
End bp2533132 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID642790416 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_002220960 
Protein GI198284639 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.085304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.899352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTGGA CAGAGTCCGT TCATCATGGA GTACAGGTCA TGGCGTTGAC GATTCCCGCC 
CCCGACCGGG AGGATGCCGC TGCCGATGCG CCGGGTGTGG CGGTATTGGC GGCAGGGTGC
TTCTGGTGTG TGGAGGCGGT GTATCTGGGC CTCGCGGGAG TGACGCGGAT CGTGTCCGGT
TATACGGGCG GCGCGGCGCA AACGGCCAAT TACCGGGCGG TATGCACGGG GACGACCGGC
CACGCCGAGG CAGTGGAGAT TCACTACGAT CCGGCGTTGC TGTCGTTTGG CCGGCTGTTA
CAGGTCTTTT TTGCGGTGGC CCACGATCCG ACCCAGCGCG ACCGGCAGGG GAATGATGTG
GGGACCCAAT ACCGGTCCGC GATATTCACC GTGAATGACG CCCAGATGGC GCTGGCGCGG
GACTATGTGG CGCAACTTGA TCAGGCGAAG GTTTTTGCCG GACCCATCGC CACCGAAATC
ACGCCCCTGA CCCATTTTTA TCCGGCGGAA GACTATCACC AGGATTATGC CCGCCAGCAT
CCGGATCAGC CCTATATATG TGCGGTGGCG CTGCCGAAAG TGGAAAAACT GCGCACGCGC
TTTCCGCAAT GGTTGCGTGA GAATCAACGG AGGTGA
 
Protein sequence
MLWTESVHHG VQVMALTIPA PDREDAAADA PGVAVLAAGC FWCVEAVYLG LAGVTRIVSG 
YTGGAAQTAN YRAVCTGTTG HAEAVEIHYD PALLSFGRLL QVFFAVAHDP TQRDRQGNDV
GTQYRSAIFT VNDAQMALAR DYVAQLDQAK VFAGPIATEI TPLTHFYPAE DYHQDYARQH
PDQPYICAVA LPKVEKLRTR FPQWLRENQR R