| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2502 |
|---|
| Symbol | |
|---|
| ID | 6878500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2464624 |
|---|
| End bp | 2465550 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642790358 |
|---|
| Product | phage SPO1 DNA polymerase-related protein |
|---|
| Protein accession | YP_002220903 |
|---|
| Protein GI | 198284582 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.934489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACA TCCTCAGCGA CAAACAGCGC CAGTTCCTGC AACTTTTGCG CATGCCCGTG
CCCGGCGATC CGCCGCCGGA GCTGGCGCAG GCCAAAACGA CGGCAACCGC CGCTGATGCC
GCAGCGAACC GATCTGTACC TGCGCCATCA GCGTCGGAGT TTGTTCCGAC GCCCCTTGTG
GAGACGTCCG TGCCGCGCCC GCCCCCCGTC GAAGAACAGC CCCCGGTAGC AGGTAGCGTA
GCACCAGGCA CGGCACTCCC ATCCTCAGGG ACCGCCCCCA TTCCGGTCAG CGGCACACCG
CCGCCGGTAC CTGCTGATCA GGCCAGCGTC ACTGCGGTGG AGGCGCATCG CACCGCCCGC
ATCGCCACCC TGGACTGGCG TGACCTCAGT AACATGGTCA GTACCTGTCA GGCCTGCCCC
TTGGGCCAAA CCCGCAAACA TGCCGTATTC GGTGCGGGCA ACCCGCACGG GTCCTGGCTC
TTTGTCGGCG AGGCGCCGGG CGCGGAAGAA GACCGCCGCG GCGAAGCCTT TGTGGGTCGT
GCCGGTCAAC TCCTCGACAA CATGCTCCAG GCCATGGGCC TGAGTCGCGA CAAAGACGCC
TACATTGCCA ATATCCTCAA ATGCCGCCCC CCCAACAACC GTGATCCGCT GGGTCCGGAA
GTGCATGCCT GCACGCCCTA TCTGCAGCGC CAGATCGCGC TTTTACAGCC GCGTGTGATC
GTTGCCCTGG GACGCTTTGC TGCGCAGGGC TTGCTTCAGG TGAATACGCC GCTCAGCCAA
CTGCGTGGCA CCACCCAGCA CTTCCAAGGC ATTCCCCTGA TTGTCACCTA CCACCCCGCC
TATCTGTTGC GTAACCCCAT CGACAAGCGC AAGGTCTGGG AGGATCTGAA GCGGGCGTTG
GGGGTGTTTG CGGAGTTGCA GAAATAA
|
|---|
| Protein sequence | MPDILSDKQR QFLQLLRMPV PGDPPPELAQ AKTTATAADA AANRSVPAPS ASEFVPTPLV
ETSVPRPPPV EEQPPVAGSV APGTALPSSG TAPIPVSGTP PPVPADQASV TAVEAHRTAR
IATLDWRDLS NMVSTCQACP LGQTRKHAVF GAGNPHGSWL FVGEAPGAEE DRRGEAFVGR
AGQLLDNMLQ AMGLSRDKDA YIANILKCRP PNNRDPLGPE VHACTPYLQR QIALLQPRVI
VALGRFAAQG LLQVNTPLSQ LRGTTQHFQG IPLIVTYHPA YLLRNPIDKR KVWEDLKRAL
GVFAELQK
|
|---|
| |