Gene Lferr_2463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2463 
Symbol 
ID6878461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2428750 
End bp2429559 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content65% 
IMG OID642790320 
Productglutamate racemase 
Protein accessionYP_002220865 
Protein GI198284544 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.794821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GCATATTCGA CTCGGGCATC GGCGGCCTCA GCACGCTGCT CAGTTGCCTG 
CGCTACCTGC CTGACGCGCA TTATCTTTTC TATGGCGACA GCGCCCACGC GCCCTACGGC
GACAAAAGCC CTGCGCAGGT GCGGGAGTGG ACGGAAGCAG CCTATGCATG GTTCATCGCC
GCTGGCGTGG ACGCGGTAGT GCTCGCCTGC AATACCGCCA CCAGCGCCGC CGTCGCGCCG
TTACGGGAGC GCGCCGACGT CCCCATCATC GGCATCGAAC CAGCCATCCG GAAAGCGCTG
ACCGAGCACC CCCAGGGGGG CGTTCTCCTG CTCGCCACCA GCATCACCGT CGGCGGCGAA
AAACTGCGGA ACCTTCTGAA CCTGCTGGAA AACGGGCAGG AACGCGTCCG CCCGCTGGCC
TGCTCCGGGC TCGCCGAGAT CATCGAGGCG CAGGACGCGG ACTGGAGGCT CCGCGCCGGT
CGTTATCTAC AGGCGCAGGT CCGGCCCGCA CGAACTGCGG ATATCGGCGT GGTCGTCCTG
GGTTGTACCC ATTACTGCTG GATCGACGAC CTGATACACG ACACCTTGGG CGGGGATATT
ACCGTCGTCG ATGGTAATGA AGGAGTTGCC CGTCAGTTAT GTCGCCGACT GGGCGTCCCC
ATCCGGACGG ACACGGCGCC GCCACTACCC CGTCACGCCC GGATATCCTT GTACTTCACC
GCCAACAATG ACGTAAAAAG CCACCTGGCT CGCCAGCTTT TGGCCGCAAG CGGGGTGCGC
ATGGATTCGC AGCCCGATTC GCCCCTCTGA
 
Protein sequence
MRIGIFDSGI GGLSTLLSCL RYLPDAHYLF YGDSAHAPYG DKSPAQVREW TEAAYAWFIA 
AGVDAVVLAC NTATSAAVAP LRERADVPII GIEPAIRKAL TEHPQGGVLL LATSITVGGE
KLRNLLNLLE NGQERVRPLA CSGLAEIIEA QDADWRLRAG RYLQAQVRPA RTADIGVVVL
GCTHYCWIDD LIHDTLGGDI TVVDGNEGVA RQLCRRLGVP IRTDTAPPLP RHARISLYFT
ANNDVKSHLA RQLLAASGVR MDSQPDSPL