Gene Lferr_2365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2365 
Symbol 
ID6878361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2337855 
End bp2338538 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content65% 
IMG OID642790226 
Productprotein of unknown function DUF484 
Protein accessionYP_002220773 
Protein GI198284452 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.108305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000169554 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCTACGG AGCCTGAACT GGAAACACAG GCGGATCAGG TCCTGGCCTA TCTCCGTCAG 
CATCCGCAAT TTTTGTGGGA TCAGGAAGAC CTGCTCCACA CCTTGACCCT GCCCCATGTC
GGACGTGGTT CCGCTTCGTC CCTGCTGGAG CGGCAGGCGC AGGTGCTGCG CGAAGAAAAC
CTCCGGCTGC ATCAGCGTAT CAGCGCGCTG CTGGGTGCCG CCCAGCAGAA TGCCGCACTC
GGCCTGCACC TCTCCGATCT GGCTACCGAA CTGTTGCAGA CACCCGACTG TACCACGACC
GTCAATACCG TCATCACCCG TCTGCGGGAG GGTTTTCAGG TGGAGGAAAT GGCCTTGATC
GCCCGCGCAC CCGTGGCCGG ACTGCCCCAG TTCCTACCGT TGGAGCAGGC TGATTTTCAG
GAGATTCTGA ACGGCCTACC GTTGTTGCGC GCCGCAACCG GGCTGGCCCT GAGCCCGACC
CTGCGCAGCA CCCTCTTCGG CGCGGCAGGG GCGGGACTGG CGTCCTTCGC CCTGATCCCG
CTTGCCGGTC GGCATCTGCA AGGAGGGATT CTGCTCGGCA GCCAGCACCC CGACCGCTAT
GCCGAGGACG CCGGGGCCGA CCTGCTCGAC CAGATTGCCC GCCTGGTCAC GGCGGCACTG
GATCGCTGCC TGGCCCCATG CTGA
 
Protein sequence
MATEPELETQ ADQVLAYLRQ HPQFLWDQED LLHTLTLPHV GRGSASSLLE RQAQVLREEN 
LRLHQRISAL LGAAQQNAAL GLHLSDLATE LLQTPDCTTT VNTVITRLRE GFQVEEMALI
ARAPVAGLPQ FLPLEQADFQ EILNGLPLLR AATGLALSPT LRSTLFGAAG AGLASFALIP
LAGRHLQGGI LLGSQHPDRY AEDAGADLLD QIARLVTAAL DRCLAPC