Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2338 |
Symbol | |
ID | 6878332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2313356 |
End bp | 2315644 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642790197 |
Product | sulfotransferase |
Protein accession | YP_002220746 |
Protein GI | 198284425 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.355943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.127881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAA AACGCGACCC CTCGGGAAAA GACGCCGCTC ATGTTGCCCT GGAAGCCATA AAAAGCCACT ATTCCCAACA AAAATACGGT GACGCGATCA CGCTGATCGA ACAGGCAACG GCCATCCCGG CGGCGGAAAA AATAAACCTC CTCACCACCA TAGGGCAGGC CACGGCCGGA AGTGCCAGAC TGGACCTGGC CGAACGCGCA TTCAGGGCGG CGCTTGCCGT GGATGGTCAC CACACGGATA CCCTCAGTAA TCTCGCACTC ATATTGTTTC ATCAAAACAA ATTGGTGGCC GCCGAAGAAC TTTACCTCGC AGCCATCGCG TCGAAGCCCG ATTTCGTGCC CGCATGGTAT AACTACGGGC TCCTGCTCCT CGCCTGCCAG CGTTTCCCGG AAGCGGAACG TGCCTTTCGC GAAGCGCTGG CGCGCAGCCC GGAATGTCTG GATTGCCTCG TCCAGTTGGG CGTCACGCTG GCGCAGCAGG GCCGGCAGGA AGACGCGCGG GTGTTATTGG ACAAGGCGCT GGACACGGAC CCCAACCACG CCGTCGCCCT GCATCACAGG AATATGCTCG CGTTGGCCAC CGGCGACCAT TGCGGCGCCG AAGCCCTGTT CCGGCGGCGG ATGCATCTGT ACGGCGAAAA TCCGTCGCTG CTGATCGGTC TGGGAATCGC CCTGCAGGAG CAGGGCCGGT TGACCGAAGC GGAAGAAATA TTCAGAAGAA CCGCCGATAC CTATTCCGTG CATGCGGATG TCGGACATTA TATTTTTCAG AATCTCGTGG CACAGCAACG CGAACGGGAA GCCGAGGCGT ACATTCGATC CGCCATCGCC GATCATCCCC AGAGCCATTC TCTCCGCTAT CCTCTGGGTA CCCTGCTGTT CCAGCAGGGT CGTTATCCCG AAACCCTGGA AGTGCTGCTG CACACGTTAA ACCTGAAGCC TGACCATGTC GATGCCCTCA TCTTGTCAGG GCGGGCACTG TTTCAATTGA AGTATGTGGA TGAGGCGGTG GAGACCTTCC ACAGGGCGCT GGAACTTCTG CCGGAGTCTG CGGATGCGCA ATTTCATCTG AGCGTTGCCC TGATCCACAT GGGAGAATGC CGGACGGCAG AGGGCATGAT CCGCAAGCTG CTCGAAAACC AGCCGGACAA CGCCGCAGCG CTGGTGAACC TGGCGATCTG CCTGGAGAAA CTGGGCGAGG TCGAGGCTGC CGAAACGACT CTGCGGAAGG CCGGGAATCT GGCGCCCACC GACCTTCGGG TGCGGGTCGC CCTTGCCGAG ATACTCCAAC GACAGAAAAA TTACGCGGAA TCTTTCGCAC TGATAGAACC ACTGTTGTCA TGGGAAAGCG GCGGAGAAGG GGAAAATTAC GCCGTCAACG CCTGGTTCAT TGCCGGAAAC CACCACCACA GCCATCGGCA ATACGCCAAA GCGTTCGCCT GTTACCGTCA GGGACATCAG ATGCTGCAAA AGGTCGAACC CTTCGATTTC CAGGCCATGG CCGACACCCT GCGGAATGAC CTGGACAGGT ATGATCGCTG GAAGGGCCGC ATGGCGGTGG CGACGCCAAA CGGTCCGACC CCCTTGTTCA TCGTCGGCAT GCCCCGGTCC GGAACCAGTC TGCTGCATCA GATGTTGGAC ATGCACGCCG ACATCGACGG CCTTGGCGAA CTCCGGCATC TTCCCCAGGC CGCCGCCAAA CTGCGGAGCC TGCGCCTCGA CTCCGAAAAC CTGACGGATC ACATCGGCGC AATTCGCCAA TGGTATCTGG ACAGGATCCG GCACCGATGG ACCGGAAGCC GATACTTTAT CGACAAGCTG CCCACCAATT TTCTGTTTCT GGGCAGCGCA AAACTCCTGT TCCCGGAAGC AAAAGTCATT TACTGCCGAC GCGATGCGCG CGACAACTGC CTTTCCATAT TTCAGCAGAA CATGGTCGGG GACCATGCCT ACAGCCACGA CCTCGACAGC CTGGGAAAAT ACTATCGCGC GCATCTGAAA ACCCTCGCCC AATGGCAATC CCGCATGGCG GAGGATGTCA TTACCGTAGG CTATGAAGAC ATCGTCGCCG ACCCCGAAAA CGGCATCCGG GAAATATTGC AATTCCTGAA GTTGGAGTAC GATCCGCGCT GCCTGGATTT TACCGAAAAC ACCCGGATGC TGCAGACGGC CAGCCGCCTG CAGGTCAAAG AGCCCATCTA CCGTTCGGCC ATCGGCAAAT GGGAAGCTTA CACCGGACAC CTCGCGCCGC TGCTGACCGC GCTCGGGCAG GGGGACTGA
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Protein sequence | MFKKRDPSGK DAAHVALEAI KSHYSQQKYG DAITLIEQAT AIPAAEKINL LTTIGQATAG SARLDLAERA FRAALAVDGH HTDTLSNLAL ILFHQNKLVA AEELYLAAIA SKPDFVPAWY NYGLLLLACQ RFPEAERAFR EALARSPECL DCLVQLGVTL AQQGRQEDAR VLLDKALDTD PNHAVALHHR NMLALATGDH CGAEALFRRR MHLYGENPSL LIGLGIALQE QGRLTEAEEI FRRTADTYSV HADVGHYIFQ NLVAQQRERE AEAYIRSAIA DHPQSHSLRY PLGTLLFQQG RYPETLEVLL HTLNLKPDHV DALILSGRAL FQLKYVDEAV ETFHRALELL PESADAQFHL SVALIHMGEC RTAEGMIRKL LENQPDNAAA LVNLAICLEK LGEVEAAETT LRKAGNLAPT DLRVRVALAE ILQRQKNYAE SFALIEPLLS WESGGEGENY AVNAWFIAGN HHHSHRQYAK AFACYRQGHQ MLQKVEPFDF QAMADTLRND LDRYDRWKGR MAVATPNGPT PLFIVGMPRS GTSLLHQMLD MHADIDGLGE LRHLPQAAAK LRSLRLDSEN LTDHIGAIRQ WYLDRIRHRW TGSRYFIDKL PTNFLFLGSA KLLFPEAKVI YCRRDARDNC LSIFQQNMVG DHAYSHDLDS LGKYYRAHLK TLAQWQSRMA EDVITVGYED IVADPENGIR EILQFLKLEY DPRCLDFTEN TRMLQTASRL QVKEPIYRSA IGKWEAYTGH LAPLLTALGQ GD
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